Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
23198870
mitochondrion: 27297264 mitochondrion: 29575040 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
23198870
doi
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19931 | Sorghum | mitochondrion | 94.4 | 94.4 |
| HORVU4Hr1G013230.1 | Barley | cytosol | 24.4 | 87.14 |
| HORVU6Hr1G043720.1 | Barley | cytosol | 16.4 | 82.0 |
| TraesCS1D01G396400.1 | Wheat | mitochondrion | 73.2 | 71.48 |
| TraesCS1A01G388500.1 | Wheat | mitochondrion | 73.2 | 71.21 |
| TraesCS1B01G415900.1 | Wheat | mitochondrion | 72.0 | 69.77 |
| Os05t0557800-02 | Rice | mitochondrion | 69.6 | 69.6 |
| CDY23263 | Canola | cytosol | 44.8 | 67.07 |
| VIT_00s0265g00080.t01 | Wine grape | cytosol, nucleus, plastid | 20.4 | 57.3 |
| HORVU1Hr1G085550.1 | Barley | plastid | 72.0 | 56.25 |
| KRH20452 | Soybean | mitochondrion | 55.6 | 52.06 |
| KRH50046 | Soybean | mitochondrion | 54.4 | 51.91 |
| GSMUA_Achr9P06220_001 | Banana | mitochondrion | 54.8 | 51.7 |
| CDY36464 | Canola | mitochondrion | 52.0 | 50.98 |
| Bra024036.1-P | Field mustard | mitochondrion | 54.4 | 50.94 |
| CDX68704 | Canola | mitochondrion | 52.0 | 50.39 |
| CDY13395 | Canola | mitochondrion | 52.4 | 50.19 |
| PGSC0003DMT400076437 | Potato | plastid | 54.0 | 50.19 |
| Solyc02g078200.2.1 | Tomato | nucleus | 52.8 | 50.0 |
| Bra010267.1-P | Field mustard | mitochondrion | 51.2 | 49.61 |
| VIT_14s0060g00010.t01 | Wine grape | mitochondrion | 17.2 | 48.31 |
| CDY28228 | Canola | mitochondrion | 50.0 | 48.26 |
| AT4G30930.1 | Thale cress | mitochondrion | 52.0 | 48.15 |
| Bra011233.1-P | Field mustard | mitochondrion | 49.2 | 47.67 |
| Zm00001d016072_P001 | Maize | plastid | 29.6 | 31.36 |
| Zm00001d053377_P001 | Maize | plastid | 28.0 | 30.84 |
Protein Annotations
| MapMan:17.7.1.1.19 | ProteinID:AQK88350.1 | ProteinID:AQK88351.1 | UniProt:B4FI28 | EMBL:BT036766 | GO:GO:0000003 |
| GO:GO:0000741 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009553 | GO:GO:0009555 | GO:GO:0009567 | GO:GO:0009987 | GO:GO:0010197 |
| GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030154 | GO:GO:0043565 | InterPro:L21-like_sf | InterPro:L21p-like |
| HAMAP:MF_01363 | PFAM:PF00829 | ScanProsite:PS01169 | PANTHER:PTHR21349 | InterPro:Ribosomal_L21 | InterPro:Ribosomal_L21_CS |
| SUPFAM:SSF141091 | TIGRFAMs:TIGR00061 | UniParc:UPI00017B6F1F | EnsemblPlantsGene:Zm00001d038973 | EnsemblPlants:Zm00001d038973_P001 | EnsemblPlants:Zm00001d038973_T001 |
| SEG:seg | : | : | : | : | : |
Description
50S ribosomal protein L21 mitochondrial
Coordinates
chr6:-:168027264..168030325
Molecular Weight (calculated)
27654.8 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.506
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRRCLLRF LSIRLVPQRS QPLAPISTAT RTLTSLSEAL GSPAPRALAS PRLYYPSRCH FATRSSGDED DGEDEEEHYD DEGSDGEWGD DEEVVAAKKP
101: SGKTEEEKVA EAAEIGYKVL GPLGADDKPF KPYEPVFAVV QIGSHQFKVS NGDSIFTERL KFCDVNDKLV LNRVLMLGSQ AQTVIGRPIL PDAAVHAVVE
201: EHALDAKVII FKKKRRKNYR RTKGHRQELT KLRITNIEGI DKPEAAAVAT
101: SGKTEEEKVA EAAEIGYKVL GPLGADDKPF KPYEPVFAVV QIGSHQFKVS NGDSIFTERL KFCDVNDKLV LNRVLMLGSQ AQTVIGRPIL PDAAVHAVVE
201: EHALDAKVII FKKKRRKNYR RTKGHRQELT KLRITNIEGI DKPEAAAVAT
001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA
Arabidopsis Description
RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.