Factsheet for HORVU1Hr1G085550.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G388500.1	Wheat	mitochondrion	76.25	94.94
HORVU4Hr1G013230.1	Barley	cytosol	20.31	92.86
TraesCS1B01G415900.1	Wheat	mitochondrion	74.38	92.25
TraesCS1D01G396400.1	Wheat	mitochondrion	73.75	92.19
HORVU6Hr1G043720.1	Barley	cytosol	13.12	84.0
Zm00001d038973_P001	Maize	mitochondrion	56.25	72.0
EES19931	Sorghum	mitochondrion	55.31	70.8
Os05t0557800-02	Rice	mitochondrion	55.31	70.8
CDY23263	Canola	cytosol	34.69	66.47
VIT_00s0265g00080.t01	Wine grape	cytosol, nucleus, plastid	15.31	55.06
KRH50046	Soybean	mitochondrion	42.81	52.29
KRH20452	Soybean	mitochondrion	43.12	51.69
Solyc02g078200.2.1	Tomato	nucleus	41.88	50.76
VIT_14s0060g00010.t01	Wine grape	mitochondrion	14.06	50.56
PGSC0003DMT400076437	Potato	plastid	41.88	49.81
Bra010267.1-P	Field mustard	mitochondrion	40.0	49.61
CDY36464	Canola	mitochondrion	39.38	49.41
CDY13395	Canola	mitochondrion	39.38	48.28
CDY28228	Canola	mitochondrion	39.06	48.26
Bra011233.1-P	Field mustard	mitochondrion	38.75	48.06
CDX68704	Canola	mitochondrion	38.44	47.67
Bra024036.1-P	Field mustard	mitochondrion	39.69	47.57
GSMUA_Achr9P06220_001	Banana	mitochondrion	39.38	47.55
AT4G30930.1	Thale cress	mitochondrion	38.75	45.93
HORVU6Hr1G041020.1	Barley	plastid	23.44	29.41

Protein Annotations

MapMan:17.7.1.1.19	UniProt:A0A287GKH4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G085550	EnsemblPlants:HORVU1Hr1G085550.1	InterPro:L21-like_sf	InterPro:L21p-like	HAMAP:MF_01363
PFAM:PF00829	ScanProsite:PS01169	PANTHER:PTHR21349	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS	SUPFAM:SSF141091
TIGRFAMs:TIGR00061	UniParc:UPI000B47C7A0	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:535875167..535878574

Molecular Weight (calculated)

34379.8 Da

IEP (calculated)

7.613

GRAVY (calculated)

-0.430

Length

320 amino acids

Sequence
(BLAST)

001: APSPLDHAYP PVTVSPAARC EQGPPAVSLP SLKPSSKPLG KINISISTLP SSSSSPPSAA AAAAAVAMAT RRCLLRLLAR GLAPHAPQPL APASIAARTL
101: TSLPRPLAPR AAAASPRLSP PRCHFATRSS DDEEHYEDEE DGSGDEWGED DEETPAAKPP SGKTEEEKLA EADEIGYKVV GPLGADEKPF KPYEPVFAVV
201: QIGSHQFKVS NGDSIFTERL KFCDVNDKLV LNRVLMLGSQ AQTIIGRPTL TDATVHAVVE EHALDAKVII FKKKRRKNYR RTRGHRQELT KLRITNIEGI
301: DKSFIQQEGT DKPESVAVAA

Best Arabidopsis Sequence Match ( AT4G30930.1 )
(BLAST)

001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA

Arabidopsis Description

RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.