Factsheet for HORVU6Hr1G041020.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G219700.1	Wheat	mitochondrion	59.22	74.75
TraesCS6D01G174500.1	Wheat	mitochondrion	58.82	74.26
TraesCS6A01G191400.2	Wheat	mitochondrion	58.82	74.26
Os02t0259600-01	Rice	plastid	56.47	67.29
EES06613	Sorghum	plastid	53.33	65.07
Zm00001d053377_P001	Maize	plastid	55.29	62.11
Zm00001d016072_P001	Maize	plastid	52.94	57.2
GSMUA_Achr8P19820_001	Banana	plastid	42.35	48.21
CDY41872	Canola	plastid	38.04	47.78
Bra036763.1-P	Field mustard	plastid	37.65	47.29
CDX91752	Canola	plastid	37.65	47.29
VIT_15s0046g02910.t01	Wine grape	plastid	37.25	45.45
AT1G35680.1	Thale cress	plastid	37.65	43.64
Solyc06g065390.2.1	Tomato	plastid	36.08	43.4
PGSC0003DMT400067084	Potato	plastid	35.29	41.67
KRG91805	Soybean	nucleus, plastid	33.33	39.91
KRH34980	Soybean	mitochondrion, nucleus, plastid	32.16	38.5
HORVU6Hr1G043720.1	Barley	cytosol	7.06	36.0
GSMUA_Achr5P06830_001	Banana	cytosol, plastid	21.18	35.53
HORVU4Hr1G013230.1	Barley	cytosol	7.84	28.57
HORVU1Hr1G085550.1	Barley	plastid	29.41	23.44

Protein Annotations

MapMan:17.7.2.1.19	UniProt:A0A287U1M6	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009628	GO:GO:0009658	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009941	GO:GO:0009987	GO:GO:0010027	GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G041020
EnsemblPlants:HORVU6Hr1G041020.1	InterPro:L21-like_sf	InterPro:L21p-like	HAMAP:MF_01363	PFAM:PF00829	ScanProsite:PS01169
PANTHER:PTHR21349	PANTHER:PTHR21349:SF2	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS	SUPFAM:SSF141091	TIGRFAMs:TIGR00061
UniParc:UPI000B46CDE2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:223064500..223073791

Molecular Weight (calculated)

28003.9 Da

IEP (calculated)

9.679

GRAVY (calculated)

-0.084

Length

255 amino acids

Sequence
(BLAST)

001: ELAANFHNDR CNYLVSEHAI FLLSTILSHS PLRPKTLQSS IRRSPSPSFR APSMATATLP LRLLPSRTPL LHAAAFLPAS TSLSLTAPAT RNWRIFAAAE
101: EAPAPVEAEV EEVVEDAAVP EPVEVQLAAA GAGKDADIFA VVMIGSRQYI VMPGRYIYTQ RLKDANVNDQ IILNKVLLVS TRDKAYIGMP VVTNAAVHAI
201: VEEQGLDDKV IVFKFKKKKK YQRKAGHRQP NTRLRITGIS GYEEYPADPI LQVPA

Best Arabidopsis Sequence Match ( AT1G35680.1 )
(BLAST)

001: MASSSATLSL CSTFSAHCNV NSRRSSTILC SLSKPSLNLA KPLTGFLSPS TASTSRTAFT VAPKFAESVV EAEPETTDIE AVVVSDVSEV TEEKAKREEI
101: FAVIMVGGRQ YIVFPGRYLY TQRLKDANVD DQIVLNKVLL VGTKTHTYIG KPVVTNATVH AVVESQGLND KVVVFKYKPK KKYRRNIGHR QPNTRIRITG
201: ITGYEEYPAS PNVAVGEVNL

Arabidopsis Description

RPL2150S ribosomal protein L21, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P51412]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.