Factsheet for TraesCS6B01G219700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G174500.1	Wheat	mitochondrion	98.51	98.51
TraesCS6A01G191400.2	Wheat	mitochondrion	98.02	98.02
EES06613	Sorghum	plastid	74.75	72.25
Os02t0259600-01	Rice	plastid	70.3	66.36
Zm00001d053377_P001	Maize	plastid	71.78	63.88
Zm00001d016072_P001	Maize	plastid	69.8	59.75
HORVU6Hr1G041020.1	Barley	plastid	74.75	59.22
GSMUA_Achr8P19820_001	Banana	plastid	54.46	49.11
VIT_15s0046g02910.t01	Wine grape	plastid	49.01	47.37
Bra036763.1-P	Field mustard	plastid	47.52	47.29
CDX91752	Canola	plastid	47.52	47.29
CDY41872	Canola	plastid	47.03	46.8
Solyc06g065390.2.1	Tomato	plastid	47.03	44.81
AT1G35680.1	Thale cress	plastid	47.52	43.64
PGSC0003DMT400067084	Potato	plastid	46.04	43.06
KRG91805	Soybean	nucleus, plastid	43.07	40.85
KRH34980	Soybean	mitochondrion, nucleus, plastid	41.58	39.44
GSMUA_Achr5P06830_001	Banana	cytosol, plastid	25.74	34.21
TraesCS1B01G415900.1	Wheat	mitochondrion	33.66	26.36

Protein Annotations

MapMan:17.7.2.1.19	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009628	GO:GO:0009658	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009941
GO:GO:0009987	GO:GO:0010027	GO:GO:0016043	GO:GO:0019538	InterPro:L21-like_sf	InterPro:L21p-like
HAMAP:MF_01363	PFAM:PF00829	ScanProsite:PS01169	PANTHER:PTHR21349	PANTHER:PTHR21349:SF2	InterPro:Ribosomal_L21
InterPro:Ribosomal_L21_CS	SUPFAM:SSF141091	TIGRFAMs:TIGR00061	EnsemblPlantsGene:TraesCS6B01G219700	EnsemblPlants:TraesCS6B01G219700.1	SEG:seg

Description

No Description!

Coordinates

chr6B:+:309684988..309688640

Molecular Weight (calculated)

22036.8 Da

IEP (calculated)

9.292

GRAVY (calculated)

0.000

Length

202 amino acids

Sequence
(BLAST)

001: MATATLPLRL LPSRTPLLHT AAFLPASASL SVTASVPRHW RIFAAAEEAP APVEAEAEEV VEDAAVPEPV EVQLAAAGAG KDADIFAVVM IGSRQYIVMP
101: GRYIYTQRLK DANVNDQIIL NKVLLVSTRD KAYIGMPVVT NAAVHAIVEE QGLDDKVIVF KFKKKKKYQR KAGHRQPNTR LRITGISGYE EFPADPILQV
201: PA

Best Arabidopsis Sequence Match ( AT1G35680.1 )
(BLAST)

001: MASSSATLSL CSTFSAHCNV NSRRSSTILC SLSKPSLNLA KPLTGFLSPS TASTSRTAFT VAPKFAESVV EAEPETTDIE AVVVSDVSEV TEEKAKREEI
101: FAVIMVGGRQ YIVFPGRYLY TQRLKDANVD DQIVLNKVLL VGTKTHTYIG KPVVTNATVH AVVESQGLND KVVVFKYKPK KKYRRNIGHR QPNTRIRITG
201: ITGYEEYPAS PNVAVGEVNL

Arabidopsis Description

RPL2150S ribosomal protein L21, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P51412]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.