Factsheet for Bra036763.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91752	Canola	plastid	98.52	98.52
CDY41872	Canola	plastid	91.13	91.13
AT1G35680.1	Thale cress	plastid	75.86	70.0
VIT_15s0046g02910.t01	Wine grape	plastid	54.19	52.63
Solyc06g065390.2.1	Tomato	plastid	52.22	50.0
PGSC0003DMT400067084	Potato	plastid	52.71	49.54
TraesCS6D01G174500.1	Wheat	mitochondrion	47.29	47.52
TraesCS6B01G219700.1	Wheat	mitochondrion	47.29	47.52
TraesCS6A01G191400.2	Wheat	mitochondrion	47.29	47.52
GSMUA_Achr8P19820_001	Banana	plastid	51.72	46.88
EES06613	Sorghum	plastid	47.78	46.41
Zm00001d053377_P001	Maize	plastid	51.23	45.81
KRG91805	Soybean	nucleus, plastid	47.78	45.54
KRH34980	Soybean	mitochondrion, nucleus, plastid	46.8	44.6
Os02t0259600-01	Rice	plastid	45.81	43.46
Zm00001d016072_P001	Maize	plastid	49.75	42.8
HORVU6Hr1G041020.1	Barley	plastid	47.29	37.65
GSMUA_Achr5P06830_001	Banana	cytosol, plastid	22.66	30.26
Bra010267.1-P	Field mustard	mitochondrion	33.0	25.97
Bra024036.1-P	Field mustard	mitochondrion	32.51	24.72
Bra011233.1-P	Field mustard	mitochondrion	31.03	24.42

Protein Annotations

MapMan:17.7.2.1.19	EnsemblPlantsGene:Bra036763	EnsemblPlants:Bra036763.1	EnsemblPlants:Bra036763.1-P	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009658	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009941	GO:GO:0009987	GO:GO:0010027	GO:GO:0016043
GO:GO:0019538	InterPro:L21-like_sf	InterPro:L21p-like	UniProt:M4F6Q3	HAMAP:MF_01363	PFAM:PF00829
ScanProsite:PS01169	PANTHER:PTHR21349	PANTHER:PTHR21349:SF2	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS	SUPFAM:SSF141091
TIGRFAMs:TIGR00061	UniParc:UPI0002545DFC	SEG:seg	:	:	:

Description

AT1G35680 (E=2e-076) | 50S ribosomal protein L21, chloroplast / CL21 (RPL21)

Coordinates

chrA08:-:7193401..7194480

Molecular Weight (calculated)

22058.6 Da

IEP (calculated)

10.173

GRAVY (calculated)

-0.145

Length

203 amino acids

Sequence
(BLAST)

001: MASPSATLSL CSAFSAHCSV APPRSLSKPS LSLARPTIGF LSTSAASTSR PAFPAAPKFA ESAVVAEPET TDIEAVVVSE DKPKREEIFA VVMVGGRQYI
101: VFPGRYLYTQ RLKDANVDDQ IVLNKVLLVG TKTHTYIGKP VVTNATVHAV VENQGLNDKV VVFKYKPKKK YRRNIGHRQP NTRIRITGIT GYEEYPASPN
201: VAV

Best Arabidopsis Sequence Match ( AT1G35680.1 )
(BLAST)

001: MASSSATLSL CSTFSAHCNV NSRRSSTILC SLSKPSLNLA KPLTGFLSPS TASTSRTAFT VAPKFAESVV EAEPETTDIE AVVVSDVSEV TEEKAKREEI
101: FAVIMVGGRQ YIVFPGRYLY TQRLKDANVD DQIVLNKVLL VGTKTHTYIG KPVVTNATVH AVVESQGLND KVVVFKYKPK KKYRRNIGHR QPNTRIRITG
201: ITGYEEYPAS PNVAVGEVNL

Arabidopsis Description

RPL2150S ribosomal protein L21, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P51412]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.