CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036763.1-P	Field mustard	plastid	91.13	91.13
CDX91752	Canola	plastid	89.66	89.66
AT1G35680.1	Thale cress	plastid	75.37	69.55
VIT_15s0046g02910.t01	Wine grape	plastid	54.19	52.63
Solyc06g065390.2.1	Tomato	plastid	52.22	50.0
PGSC0003DMT400067084	Potato	plastid	52.71	49.54
TraesCS6D01G174500.1	Wheat	mitochondrion	46.8	47.03
TraesCS6B01G219700.1	Wheat	mitochondrion	46.8	47.03
TraesCS6A01G191400.2	Wheat	mitochondrion	46.8	47.03
GSMUA_Achr8P19820_001	Banana	plastid	51.23	46.43
EES06613	Sorghum	plastid	46.31	44.98
Os02t0259600-01	Rice	plastid	47.29	44.86
Zm00001d053377_P001	Maize	plastid	49.75	44.49
KRH34980	Soybean	mitochondrion, nucleus, plastid	46.31	44.13
KRG91805	Soybean	nucleus, plastid	46.31	44.13
Zm00001d016072_P001	Maize	plastid	48.28	41.53
HORVU6Hr1G041020.1	Barley	plastid	47.78	38.04
CDY23263	Canola	cytosol	27.59	33.53
GSMUA_Achr5P06830_001	Banana	cytosol, plastid	23.65	31.58
CDY36464	Canola	mitochondrion	31.53	25.1
CDY13395	Canola	mitochondrion	32.02	24.9
CDY28228	Canola	mitochondrion	30.05	23.55
CDX68704	Canola	mitochondrion	29.56	23.26

Protein Annotations

MapMan:17.7.2.1.19	GO:A0A078HVL1	UniProt:A0A078HVL1	EnsemblPlants:CDY41872	ProteinID:CDY41872	ProteinID:CDY41872.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00073821001
InterPro:L21-like_sf	InterPro:L21p-like	HAMAP:MF_01363	PFAM:PF00829	ScanProsite:PS01169	PANTHER:PTHR21349
PANTHER:PTHR21349:SF2	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS	SUPFAM:SSF141091	TIGRFAMs:TIGR00061	UniParc:UPI0004EF090D
SEG:seg	:	:	:	:	:

Description

BnaA08g06270DBnaA08g06270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVL1]

Coordinates

chrLK032509:+:106963..108241

Molecular Weight (calculated)

22028.5 Da

IEP (calculated)

10.173

GRAVY (calculated)

-0.133

Length

203 amino acids

Sequence
(BLAST)

001: MASPSATLSL CSAFSAHCSV APPRSLSKPS LSLARPAIGF LSTSAASTSR PAFPAAPKFA ESAVVAEPET TDIEAVVVSE DKPKREEIFA VVMVGGRQYI
101: VFPGRYLYTQ RLKDANVDDQ IVLNKVLLVG TKTHTYIGKP VVTNATVHAV VENQGLNDKV VVFKYKPKKK YRRNIGHRQP NTRIRITGIT GYEEYPASPN
201: VAV

Best Arabidopsis Sequence Match ( AT1G35680.1 )
(BLAST)

001: MASSSATLSL CSTFSAHCNV NSRRSSTILC SLSKPSLNLA KPLTGFLSPS TASTSRTAFT VAPKFAESVV EAEPETTDIE AVVVSDVSEV TEEKAKREEI
101: FAVIMVGGRQ YIVFPGRYLY TQRLKDANVD DQIVLNKVLL VGTKTHTYIG KPVVTNATVH AVVESQGLND KVVVFKYKPK KKYRRNIGHR QPNTRIRITG
201: ITGYEEYPAS PNVAVGEVNL

Arabidopsis Description

RPL2150S ribosomal protein L21, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P51412]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.