CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016072_P001	Maize	plastid	90.43	80.08
Zm00001d053377_P001	Maize	plastid	82.78	76.21
TraesCS6D01G174500.1	Wheat	mitochondrion	72.25	74.75
TraesCS6B01G219700.1	Wheat	mitochondrion	72.25	74.75
TraesCS6A01G191400.2	Wheat	mitochondrion	72.25	74.75
Os02t0259600-01	Rice	plastid	73.21	71.5
HORVU6Hr1G041020.1	Barley	plastid	65.07	53.33
GSMUA_Achr8P19820_001	Banana	plastid	55.98	52.23
Bra036763.1-P	Field mustard	plastid	46.41	47.78
CDX91752	Canola	plastid	46.41	47.78
Solyc06g065390.2.1	Tomato	plastid	48.33	47.64
CDY41872	Canola	plastid	44.98	46.31
PGSC0003DMT400067084	Potato	plastid	47.37	45.83
VIT_15s0046g02910.t01	Wine grape	plastid	44.98	44.98
AT1G35680.1	Thale cress	plastid	46.41	44.09
KRG91805	Soybean	nucleus, plastid	41.15	40.38
KRH34980	Soybean	mitochondrion, nucleus, plastid	39.71	38.97
GSMUA_Achr5P06830_001	Banana	cytosol, plastid	24.88	34.21
EES19931	Sorghum	mitochondrion	32.06	26.8

Protein Annotations

MapMan:17.7.2.1.19	EntrezGene:8059054	UniProt:C5XZH7	EnsemblPlants:EES06613	ProteinID:EES06613	ProteinID:EES06613.1
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0009658	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009941	GO:GO:0009987
GO:GO:0010027	GO:GO:0016043	GO:GO:0019538	InterPro:L21-like_sf	InterPro:L21p-like	HAMAP:MF_01363
PFAM:PF00829	ScanProsite:PS01169	PANTHER:PTHR21349	PANTHER:PTHR21349:SF2	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS
EnsemblPlantsGene:SORBI_3004G116100	SUPFAM:SSF141091	unigene:Sbi.1442	TIGRFAMs:TIGR00061	UniParc:UPI0001A85EAE	RefSeq:XP_002453637.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:12101470..12105836

Molecular Weight (calculated)

22886.8 Da

IEP (calculated)

9.826

GRAVY (calculated)

-0.153

Length

209 amino acids

Sequence
(BLAST)

001: MPPLPAAAMA TATLPLRLLP SKTLTLSTLA SARRSLSVAA VEPRRWRLRA AAEEAPEAVE VEFVEAEEEP AVPEPVEAQL AAAGAGKDAD IFAVVMIGSR
101: QYIVMPGRYI YTQRLKGANV NDQIILNKVL LVSTREKAYI GMPVVTNAAV HAVVEEQGRD DKVIVFKYKK KKKYQRKLGH RQPNTRLRIT GISGYEEYPA
201: DPILDPAAA

Best Arabidopsis Sequence Match ( AT1G35680.1 )
(BLAST)

001: MASSSATLSL CSTFSAHCNV NSRRSSTILC SLSKPSLNLA KPLTGFLSPS TASTSRTAFT VAPKFAESVV EAEPETTDIE AVVVSDVSEV TEEKAKREEI
101: FAVIMVGGRQ YIVFPGRYLY TQRLKDANVD DQIVLNKVLL VGTKTHTYIG KPVVTNATVH AVVESQGLND KVVVFKYKPK KKYRRNIGHR QPNTRIRITG
201: ITGYEEYPAS PNVAVGEVNL

Arabidopsis Description

RPL2150S ribosomal protein L21, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P51412]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.