Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G013230.1 | Barley | cytosol | 86.0 | 61.43 |
| VIT_00s0265g00080.t01 | Wine grape | cytosol, nucleus, plastid | 68.0 | 38.2 |
| VIT_14s0060g00010.t01 | Wine grape | mitochondrion | 58.0 | 32.58 |
| CDY23263 | Canola | cytosol | 74.0 | 22.16 |
| Os05t0557800-02 | Rice | mitochondrion | 84.0 | 16.8 |
| EES19931 | Sorghum | mitochondrion | 84.0 | 16.8 |
| TraesCS1D01G396400.1 | Wheat | mitochondrion | 84.0 | 16.41 |
| Zm00001d038973_P001 | Maize | mitochondrion | 82.0 | 16.4 |
| TraesCS1A01G388500.1 | Wheat | mitochondrion | 84.0 | 16.34 |
| TraesCS1B01G415900.1 | Wheat | mitochondrion | 82.0 | 15.89 |
| CDY36464 | Canola | mitochondrion | 76.0 | 14.9 |
| Bra011233.1-P | Field mustard | mitochondrion | 76.0 | 14.73 |
| CDX68704 | Canola | mitochondrion | 76.0 | 14.73 |
| CDY28228 | Canola | mitochondrion | 76.0 | 14.67 |
| CDY13395 | Canola | mitochondrion | 76.0 | 14.56 |
| Bra010267.1-P | Field mustard | mitochondrion | 74.0 | 14.34 |
| Bra024036.1-P | Field mustard | mitochondrion | 76.0 | 14.23 |
| KRH50046 | Soybean | mitochondrion | 74.0 | 14.12 |
| GSMUA_Achr9P06220_001 | Banana | mitochondrion | 74.0 | 13.96 |
| KRH20452 | Soybean | mitochondrion | 74.0 | 13.86 |
| AT4G30930.1 | Thale cress | mitochondrion | 74.0 | 13.7 |
| HORVU1Hr1G085550.1 | Barley | plastid | 84.0 | 13.12 |
| Solyc02g078200.2.1 | Tomato | nucleus | 68.0 | 12.88 |
| PGSC0003DMT400076437 | Potato | plastid | 68.0 | 12.64 |
| HORVU6Hr1G041020.1 | Barley | plastid | 36.0 | 7.06 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G043720.1 | EnsemblPlantsGene:HORVU6Hr1G043720 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | InterPro:L21p-like | PANTHER:PTHR21349 | PANTHER:PTHR21349:SF0 | UniParc:UPI000B4783AA | UniProt:A0A287U205 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:247941955..247942561
Molecular Weight (calculated)
5708.8 Da
IEP (calculated)
4.793
GRAVY (calculated)
-0.268
Length
50 amino acids
Sequence
(BLAST)
(BLAST)
1: MVGTDEKPFN PYEPVFPVVQ IGSHQFKVSN GDSIFTERLK FCDVNDKLCM
001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA
Arabidopsis Description
RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.