Factsheet for Os05t0557800-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G013230.1	Barley	cytosol	24.8	88.57
HORVU6Hr1G043720.1	Barley	cytosol	16.8	84.0
TraesCS1D01G396400.1	Wheat	mitochondrion	72.0	70.31
EES19931	Sorghum	mitochondrion	70.0	70.0
TraesCS1A01G388500.1	Wheat	mitochondrion	71.6	69.65
Zm00001d038973_P001	Maize	mitochondrion	69.6	69.6
TraesCS1B01G415900.1	Wheat	mitochondrion	71.2	68.99
CDY23263	Canola	cytosol	44.8	67.07
VIT_00s0265g00080.t01	Wine grape	cytosol, nucleus, plastid	20.0	56.18
HORVU1Hr1G085550.1	Barley	plastid	70.8	55.31
KRH50046	Soybean	mitochondrion	54.4	51.91
GSMUA_Achr9P06220_001	Banana	mitochondrion	54.8	51.7
Solyc02g078200.2.1	Tomato	nucleus	54.0	51.14
VIT_14s0060g00010.t01	Wine grape	mitochondrion	18.0	50.56
KRH20452	Soybean	mitochondrion	54.0	50.56
Bra011233.1-P	Field mustard	mitochondrion	52.0	50.39
CDY28228	Canola	mitochondrion	52.0	50.19
CDY36464	Canola	mitochondrion	50.8	49.8
PGSC0003DMT400076437	Potato	plastid	52.8	49.07
Bra010267.1-P	Field mustard	mitochondrion	50.4	48.84
CDY13395	Canola	mitochondrion	50.8	48.66
CDX68704	Canola	mitochondrion	50.0	48.45
Bra024036.1-P	Field mustard	mitochondrion	51.2	47.94
AT4G30930.1	Thale cress	mitochondrion	50.0	46.3
Os02t0259600-01	Rice	plastid	28.4	33.18

Protein Annotations

MapMan:17.7.1.1.19	EntrezGene:4339580	ProteinID:AAT58720.1	ProteinID:AAT85089.1	EMBL:AK068460	ProteinID:BAF18206.1
ProteinID:BAS95283.1	ProteinID:EEE64655.1	GO:GO:0000003	GO:GO:0000741	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005840	GO:GO:0006412
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009553	GO:GO:0009555
GO:GO:0009567	GO:GO:0009987	GO:GO:0010197	GO:GO:0016043	GO:GO:0019538	GO:GO:0030154
GO:GO:0043565	InterPro:L21-like_sf	InterPro:L21p-like	HAMAP:MF_01363	EnsemblPlantsGene:Os05g0557800	EnsemblPlants:Os05t0557800-02
PFAM:PF00829	ScanProsite:PS01169	PANTHER:PTHR21349	UniProt:Q6I600	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS
SUPFAM:SSF141091	TIGRFAMs:TIGR00061	UniParc:UPI00003B33AB	RefSeq:XP_015639249.1	SEG:seg	:

Description

Similar to 50S ribosomal protein L21. (Os05t0557800-01);Similar to 50S ribosomal protein L21, mitochondrial precursor. (Os05t0557800-02)

Coordinates

chr5:-:27756096..27759127

Molecular Weight (calculated)

27586.7 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.505

Length

250 amino acids

Sequence
(BLAST)

001: MATRRCLLRL LSRRLLAHTP QPASLASIAT RTLASLAKPL VPQASRVLAS PRLFPSRCHY ASNRSSGDEE EGDDDDHYDE EGSGDEWGEE EEEAVAAKPP
101: SGKTEEEKVA EAAEIGYTVV GPLGADEKPF KPYEPVFAVV QIGSHQFKVS NGDSIFTERL KFCDVNDKLI LNRVLMLGSQ SQTVIGRPTL PDATVHAVVE
201: EHALDAKVII FKKKRRKNYR RTKGHRQELT KLRITNIEGI DKSEATAVAA

Best Arabidopsis Sequence Match ( AT4G30930.1 )
(BLAST)

001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA

Arabidopsis Description

RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.