CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50046	Soybean	mitochondrion	84.27	85.88
HORVU4Hr1G013230.1	Barley	cytosol	19.48	74.29
HORVU6Hr1G043720.1	Barley	cytosol	13.86	74.0
CDY23263	Canola	cytosol	44.57	71.26
VIT_00s0265g00080.t01	Wine grape	cytosol, nucleus, plastid	21.72	65.17
Solyc02g078200.2.1	Tomato	nucleus	58.43	59.09
VIT_14s0060g00010.t01	Wine grape	mitochondrion	19.48	58.43
Bra010267.1-P	Field mustard	mitochondrion	54.31	56.2
PGSC0003DMT400076437	Potato	plastid	56.55	56.13
Zm00001d038973_P001	Maize	mitochondrion	52.06	55.6
CDY36464	Canola	mitochondrion	52.81	55.29
TraesCS1D01G396400.1	Wheat	mitochondrion	52.81	55.08
TraesCS1A01G388500.1	Wheat	mitochondrion	52.81	54.86
EES19931	Sorghum	mitochondrion	51.31	54.8
TraesCS1B01G415900.1	Wheat	mitochondrion	52.81	54.65
Os05t0557800-02	Rice	mitochondrion	50.56	54.0
Bra024036.1-P	Field mustard	mitochondrion	52.43	52.43
AT4G30930.1	Thale cress	mitochondrion	52.81	52.22
CDY13395	Canola	mitochondrion	50.94	52.11
Bra011233.1-P	Field mustard	mitochondrion	50.19	51.94
CDX68704	Canola	mitochondrion	49.81	51.55
CDY28228	Canola	mitochondrion	49.81	51.35
GSMUA_Achr9P06220_001	Banana	mitochondrion	49.44	49.81
HORVU1Hr1G085550.1	Barley	plastid	51.69	43.12
KRG91805	Soybean	nucleus, plastid	25.84	32.39
KRH34980	Soybean	mitochondrion, nucleus, plastid	25.09	31.46

Protein Annotations

EntrezGene:100780480	MapMan:17.7.1.1.19	EMBL:ACUP02008265	InterPro:ARM-type_fold	EnsemblPlantsGene:GLYMA_13G179500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	UniProt:I1M0A7	EnsemblPlants:KRH20452
ProteinID:KRH20452	ProteinID:KRH20452.1	InterPro:L21-like_sf	InterPro:L21p-like	HAMAP:MF_01363	PFAM:PF00829
ScanProsite:PS01169	PANTHER:PTHR21349	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS	SUPFAM:SSF141091	SUPFAM:SSF48371
TIGRFAMs:TIGR00061	UniParc:UPI000233B7EA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:29305699..29308921

Molecular Weight (calculated)

30254.7 Da

IEP (calculated)

6.805

GRAVY (calculated)

-0.679

Length

267 amino acids

Sequence
(BLAST)

001: MASRRCLRAL TQKTTPFLFR NASSLRSLTV PPFPNANASS PVFTVRASVF AQWPHLRYFS SEKKDDHSDE DDDGDEDYDD EEEDYVDDDD DDDVPVSRGK
101: KVYTAEEKEA EAAAIGYRVV GPLQKDEDSV FKPYEPVFAV VQIGSHQFKV SNRDSIFTER LKFCEVNDKL ILNKVLLLGS ASQTIIGRPI VPDAAVHAVV
201: EEHALDAKVI IFKKKRRKNY RRTKGHRQEL TKLRITDIQG IEKPQNVLPE KPPKPAKKEK EKVAVTA

Best Arabidopsis Sequence Match ( AT4G30930.1 )
(BLAST)

001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA

Arabidopsis Description

RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.