Factsheet for GSMUA_Achr9P06220_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G013230.1	Barley	cytosol	19.62	74.29
HORVU6Hr1G043720.1	Barley	cytosol	13.96	74.0
CDY23263	Canola	cytosol	41.13	65.27
EES19931	Sorghum	mitochondrion	53.58	56.8
VIT_00s0265g00080.t01	Wine grape	cytosol, nucleus, plastid	18.87	56.18
Zm00001d038973_P001	Maize	mitochondrion	51.7	54.8
Os05t0557800-02	Rice	mitochondrion	51.7	54.8
Solyc02g078200.2.1	Tomato	nucleus	52.08	52.27
TraesCS1A01G388500.1	Wheat	mitochondrion	49.43	50.97
TraesCS1D01G396400.1	Wheat	mitochondrion	48.68	50.39
TraesCS1B01G415900.1	Wheat	mitochondrion	49.06	50.39
KRH50046	Soybean	mitochondrion	49.81	50.38
CDY36464	Canola	mitochondrion	48.3	50.2
PGSC0003DMT400076437	Potato	plastid	50.19	49.44
KRH20452	Soybean	mitochondrion	49.81	49.44
Bra010267.1-P	Field mustard	mitochondrion	47.55	48.84
VIT_14s0060g00010.t01	Wine grape	mitochondrion	16.23	48.31
CDY13395	Canola	mitochondrion	46.79	47.51
Bra011233.1-P	Field mustard	mitochondrion	46.04	47.29
Bra024036.1-P	Field mustard	mitochondrion	47.55	47.19
CDY28228	Canola	mitochondrion	45.66	46.72
CDX68704	Canola	mitochondrion	44.91	46.12
AT4G30930.1	Thale cress	mitochondrion	46.79	45.93
HORVU1Hr1G085550.1	Barley	plastid	47.55	39.38
GSMUA_Achr8P19820_001	Banana	plastid	25.28	29.91
GSMUA_Achr5P06830_001	Banana	cytosol, plastid	12.83	22.37

Protein Annotations

MapMan:17.7.1.1.19	GO:GO:0000003	GO:GO:0000741	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005840	GO:GO:0006412	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009553	GO:GO:0009555	GO:GO:0009567
GO:GO:0009987	GO:GO:0010197	GO:GO:0016043	GO:GO:0019538	GO:GO:0030154	GO:GO:0043565
EnsemblPlantsGene:GSMUA_Achr9G06220_001	EnsemblPlants:GSMUA_Achr9P06220_001	EnsemblPlants:GSMUA_Achr9T06220_001	InterPro:L21-like_sf	InterPro:L21p-like	UniProt:M0TXY1
HAMAP:MF_01363	PFAM:PF00829	ScanProsite:PS01169	PANTHER:PTHR21349	InterPro:Ribosomal_L21	InterPro:Ribosomal_L21_CS
SUPFAM:SSF141091	TIGRFAMs:TIGR00061	UniParc:UPI000294F1D3	SEG:seg	:	:

Description

50S ribosomal protein L21, mitochondrial, putative [Source:GMGC_GENE;Acc:GSMUA_Achr9G06220_001]

Coordinates

chr9:-:3987810..3992343

Molecular Weight (calculated)

29761.0 Da

IEP (calculated)

6.379

GRAVY (calculated)

-0.640

Length

265 amino acids

Sequence
(BLAST)

001: MASRRCLGAL TRHLRSRLFS ASPLENPQTL SLRSLGFAIP QRTSSDLDIC RRAFRCSISI RFGGVRRCSS RPTNPSDEEE DEDDESEEEE EENKEGGVSS
101: DGENGDVRAS KCVVQRGKSD EEKVEEAAEI GYKVIEPLDS SENPFKSYEP FFAVVQIGSH QFKVSNGDSI FTERLKYCEV NDKLILNRVL MLGSRTETVV
201: GRPIVPDAAV HAVVEEHTLD ATVIIFKKKR RKNYRRTKGH RQELTKLRIT DIQGIDKSEN VAAVA

Best Arabidopsis Sequence Match ( AT4G30930.1 )
(BLAST)

001: MASLRCFREL SRRATTVFSI NQTRSISSFH GIEFSGTSIS HGTVIPNRSL TRNLPWYSHW YRSQDRCFSS NTKDTDEDEE SSEGEDDDEE EGEDFEDSAD
101: MEVEREYSPA EKVEEAEEIG YKVMGPLKPS ERLFKPYEPV FAIVQIGSHQ FKVSNGDSIF TEKLKFCDIN DKLELTKVLL LGSASQTIIG RPILPDATVH
201: AVVEEHALDE KVLIFKKKRR KNYRRTRGHR QELTKLRITD IQGIEKPEPK IVHKPSKEAV TEQTKAELVA

Arabidopsis Description

RPL21MNFD1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.