CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH12155
KRH37161

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	KRH12155	AT1G30860.1	21798944
AT5G58530.1	KRH37161	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30192	Soybean	plastid	88.56	90.48
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	56.78	54.47
KRH72724	Soybean	plastid	62.71	52.67
KRH17081	Soybean	plastid	64.83	50.66
PGSC0003DMT400078241	Potato	cytosol, plastid	51.27	50.42
Solyc06g082180.1.1	Tomato	cytosol, plastid	53.39	49.61
PGSC0003DMT400078242	Potato	cytosol, plastid	52.97	49.21
Bra002640.1-P	Field mustard	cytosol	24.15	48.31
GSMUA_Achr5P29410_001	Banana	mitochondrion	44.49	45.45
KRH14919	Soybean	plastid	46.61	45.45
KRH31178	Soybean	plastid	43.22	44.54
CDY59509	Canola	cytosol, plastid	47.03	44.05
GSMUA_Achr5P14280_001	Banana	plastid	42.37	43.67
GSMUA_Achr4P18760_001	Banana	plastid	43.64	43.64
KRG97693	Soybean	plastid	41.95	43.23
CDY32696	Canola	cytosol, plastid	45.76	43.03
Bra020363.1-P	Field mustard	cytosol, plastid	45.76	42.86
CDY32794	Canola	peroxisome	46.61	42.47
GSMUA_Achr6P32840_001	Banana	cytosol	41.53	42.06
GSMUA_Achr6P23380_001	Banana	mitochondrion	41.53	41.7
Os01t0829400-01	Rice	mitochondrion	43.22	40.0
AT5G58530.1	Thale cress	cytosol, plastid	46.19	39.93
TraesCS3A01G349200.1	Wheat	plastid	41.95	39.92
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	41.95	39.76
TraesCS3D01G343100.1	Wheat	plastid	41.95	39.44
GSMUA_Achr7P18270_001	Banana	mitochondrion	43.22	39.23
Zm00001d012471_P001	Maize	cytosol, plastid	19.07	39.13
HORVU3Hr1G087930.1	Barley	plastid	41.1	39.11
KXG33640	Sorghum	mitochondrion	43.64	38.87
Os05t0471350-00	Rice	mitochondrion, plastid	41.53	38.13
EES18035	Sorghum	mitochondrion	38.56	37.92
EES19677	Sorghum	plastid	42.37	37.88
Zm00001d010594_P001	Maize	plastid	39.83	37.75
TraesCS1A01G222600.1	Wheat	mitochondrion	36.44	37.23
KRH73271	Soybean	plastid	47.03	36.88
TraesCS1D01G224200.1	Wheat	mitochondrion	35.59	36.36
TraesCS1B01G235900.1	Wheat	mitochondrion	35.59	36.36
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	36.86	36.1
HORVU1Hr1G070570.1	Barley	plastid	39.41	35.63
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	37.71	35.46
TraesCS1A01G296500.1	Wheat	mitochondrion	37.71	35.18
TraesCS1D01G294800.1	Wheat	plastid	37.29	35.06
Zm00001d010509_P001	Maize	mitochondrion	36.02	34.41
KRH20755	Soybean	plastid	39.41	34.32
Zm00001d038018_P001	Maize	mitochondrion	34.75	34.31
Zm00001d043006_P001	Maize	plastid	41.53	33.91
KRH62918	Soybean	cytosol, plastid	36.86	33.85
Zm00001d038445_P001	Maize	cytosol	39.41	33.57
KRH13399	Soybean	plastid	37.29	32.96
Os10t0343900-01	Rice	cytosol	17.8	31.82
HORVU7Hr1G076170.1	Barley	plastid	27.54	29.28
Solyc06g082170.2.1	Tomato	cytosol, plastid	50.42	28.67
KRH41800	Soybean	cytosol	31.36	27.41
Os05t0353600-00	Rice	plastid	38.14	26.87
OQU81447	Sorghum	plastid	21.19	26.45
KRH72143	Soybean	mitochondrion	28.39	25.38
KRH32876	Soybean	cytosol	28.81	24.64
KRG96283	Soybean	mitochondrion	25.85	24.02
KRG95123	Soybean	plastid	41.53	23.11
KRH68025	Soybean	cytosol	25.85	23.11
KRH60067	Soybean	cytosol	30.08	21.07
KRH34627	Soybean	cytosol	30.51	19.51
KRG92161	Soybean	cytosol	30.93	19.21
KRG93517	Soybean	cytosol	35.17	18.99
KRH40113	Soybean	cytosol, mitochondrion	36.44	18.78
KRH01158	Soybean	cytosol	36.86	18.75
KRH66801	Soybean	plastid	28.81	18.13
KRH67928	Soybean	cytosol	31.36	16.16

Protein Annotations

EntrezGene:100812500	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02010852	EnsemblPlantsGene:GLYMA_18G059200	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	UniProt:I1MZW5	InterPro:IPR002109	EnsemblPlants:KRG98239	ProteinID:KRG98239
ProteinID:KRG98239.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF182	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000233E9E8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:5233333..5238208

Molecular Weight (calculated)

26748.1 Da

IEP (calculated)

9.823

GRAVY (calculated)

-0.481

Length

236 amino acids

Sequence
(BLAST)

001: MLQPWNKPRS SPFSCSSFKD IQTLFLDEPS TTTTKPKPSI FHRVTLANSL LRARSTHPKL ASRAHEDPPR ASQPHPPPSI PRSEQRVVLY FTSLRVVRAT
101: FEDCKKVRSI LRGFRVALDE RDLSMDSGFL SELRRVTGRK SGLTLPRVFI DGRYIGGAEE LRWLHESGEL KKLLEGLPAV DSHLRVCHVC DDHRFVLCGE
201: CSGARKVYAE KGGFKTCAAC NESGLIRFEW RKENDL

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.