CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER99396

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	EER99396	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038018_P001	Maize	mitochondrion	88.75	89.12
Zm00001d010509_P001	Maize	mitochondrion	86.67	84.21
TraesCS1D01G224200.1	Wheat	mitochondrion	72.92	75.76
TraesCS1B01G235900.1	Wheat	mitochondrion	72.08	74.89
TraesCS1A01G222600.1	Wheat	mitochondrion	72.08	74.89
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	71.25	70.95
Os05t0353600-00	Rice	plastid	77.08	55.22
GSMUA_Achr5P29410_001	Banana	mitochondrion	49.17	51.08
GSMUA_Achr5P14280_001	Banana	plastid	47.5	49.78
GSMUA_Achr4P18760_001	Banana	plastid	48.75	49.58
KXG33640	Sorghum	mitochondrion	53.33	48.3
EES19677	Sorghum	plastid	51.25	46.59
GSMUA_Achr6P32840_001	Banana	cytosol	45.0	46.35
Bra002640.1-P	Field mustard	cytosol	22.5	45.76
EER94843	Sorghum	cytosol	37.92	44.83
CDX74801	Canola	cytosol	30.42	43.71
GSMUA_Achr7P18270_001	Banana	mitochondrion	47.08	43.46
KRH14919	Soybean	plastid	42.92	42.56
GSMUA_Achr6P23380_001	Banana	mitochondrion	41.67	42.55
KRH30192	Soybean	plastid	39.17	40.69
KRH31178	Soybean	plastid	38.33	40.17
KRG97693	Soybean	plastid	37.92	39.74
Bra020363.1-P	Field mustard	cytosol, plastid	41.67	39.68
KXG36862	Sorghum	cytosol	35.0	39.44
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	40.0	39.02
CDY59509	Canola	cytosol, plastid	40.83	38.89
CDY32696	Canola	cytosol, plastid	40.42	38.65
PGSC0003DMT400078242	Potato	cytosol, plastid	40.83	38.58
KRG98239	Soybean	plastid	37.92	38.56
PGSC0003DMT400078241	Potato	cytosol, plastid	38.33	38.33
Solyc06g082180.1.1	Tomato	cytosol, plastid	40.42	38.19
OQU81447	Sorghum	plastid	30.0	38.1
CDY32794	Canola	peroxisome	40.42	37.45
KRH72724	Soybean	plastid	42.08	35.94
KRH73271	Soybean	plastid	42.92	34.22
VIT_13s0067g01650.t01	Wine grape	plastid	41.67	34.01
CDX74802	Canola	cytosol, mitochondrion	34.58	33.6
Bra004972.1-P	Field mustard	mitochondrion	34.58	33.6
AT5G58530.1	Thale cress	cytosol, plastid	37.5	32.97
CDY18861	Canola	mitochondrion	33.75	32.93
KRH17081	Soybean	plastid	41.25	32.78
Bra004971.1-P	Field mustard	plastid	33.33	31.62
EER95886	Sorghum	mitochondrion	30.42	26.64
EER95421	Sorghum	mitochondrion, plastid	34.17	24.4
EER91159	Sorghum	mitochondrion	35.0	23.6
KXG29248	Sorghum	cytosol	30.0	21.88
Solyc06g082170.2.1	Tomato	cytosol, plastid	37.5	21.69
EES05526	Sorghum	mitochondrion	33.33	21.05
EES14625	Sorghum	cytosol, plastid	35.42	20.99
EER88108	Sorghum	plastid	36.67	19.3
OQU82428	Sorghum	cytosol, plastid	35.42	17.1
EES10743	Sorghum	cytosol	32.08	17.07
KXG31460	Sorghum	cytosol	27.92	16.75

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8083743	UniProt:C5YWA6	EnsemblPlants:EES18035	ProteinID:EES18035
ProteinID:EES18035.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF78	EnsemblPlantsGene:SORBI_3009G102700	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A88BD8	RefSeq:XP_002439605.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:41238020..41239167

Molecular Weight (calculated)

25176.9 Da

IEP (calculated)

9.818

GRAVY (calculated)

-0.138

Length

240 amino acids

Sequence
(BLAST)

001: MWSTWVRRSK TSGRLTQSPS FSSPTGSSPT GKDYPGIGAV LDEAAGDGSP TAGAGSGSKI VLHRARSASR LRACKSFAAA AEAAAASVAG ERRVVLYFTS
101: LRAVRATFED CRAVRTILRG LRVSVDERDV SMDAAYLAEL RALMRRDRPS LPQLFVGGRL VGDAEEVRLL HESGELRRVL AGAAQAAPTP CASCGGSRFV
201: PCGACCGSHR RFSEKTGGFR ICASCNENGL VRCAACSSGS

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.