Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022403_P001 | Maize | cytosol, plastid | 84.04 | 88.18 |
| Os07t0659900-01 | Rice | cytosol | 75.59 | 76.3 |
| EER94843 | Sorghum | cytosol | 61.03 | 64.04 |
| GSMUA_Achr8P22080_001 | Banana | cytosol | 56.34 | 60.91 |
| GSMUA_Achr8P09670_001 | Banana | cytosol | 53.52 | 55.61 |
| EES18035 | Sorghum | mitochondrion | 39.44 | 35.0 |
| EES19677 | Sorghum | plastid | 38.5 | 31.06 |
| KXG33640 | Sorghum | mitochondrion | 37.56 | 30.19 |
| EER95886 | Sorghum | mitochondrion | 34.27 | 26.64 |
| KXG29248 | Sorghum | cytosol | 38.03 | 24.62 |
| EER95421 | Sorghum | mitochondrion, plastid | 37.09 | 23.51 |
| OQU81447 | Sorghum | plastid | 20.66 | 23.28 |
| EER91159 | Sorghum | mitochondrion | 36.15 | 21.63 |
| EES14625 | Sorghum | cytosol, plastid | 40.38 | 21.23 |
| EES05526 | Sorghum | mitochondrion | 36.15 | 20.26 |
| EER88108 | Sorghum | plastid | 37.56 | 17.54 |
| EES10743 | Sorghum | cytosol | 36.15 | 17.07 |
| KXG31460 | Sorghum | cytosol | 30.99 | 16.5 |
| OQU82428 | Sorghum | cytosol, plastid | 38.03 | 16.3 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | EntrezGene:8072259 | UniProt:A0A1B6QG04 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 |
| InterPro:Glutaredoxin | InterPro:IPR002109 | EnsemblPlants:KXG36862 | ProteinID:KXG36862 | ProteinID:KXG36862.2 | PFAM:PF00462 |
| PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF194 | EnsemblPlantsGene:SORBI_3002G404400 | SUPFAM:SSF52833 | unigene:Sbi.12029 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0009DC882E | RefSeq:XP_002461159.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:-:75430145..75431004
Molecular Weight (calculated)
23202.9 Da
IEP (calculated)
8.507
GRAVY (calculated)
-0.201
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDCGGVTAG SGKKPFQLTR SLTYHHHQGH RPAASAARWR RQQLADEPRA QRPQAVVLYT TSLRGVRRTF ADCTAVRAIL RGFRVAVDER DVSMDAALRR
101: ELQALLAARA RAFALPQLFI GGRLVGGADE VRQLNETGQL RRLLDGAAGQ DPAFVCDACG GVRFVPCTGC GGGRKVFVEE EDRVVRCGEC NENGLIVLDS
201: LLQNCHMVMA IGE
101: ELQALLAARA RAFALPQLFI GGRLVGGADE VRQLNETGQL RRLLDGAAGQ DPAFVCDACG GVRFVPCTGC GGGRKVFVEE EDRVVRCGEC NENGLIVLDS
201: LLQNCHMVMA IGE
001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
Arabidopsis Description
AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.