Factsheet for Zm00001d022403_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36862	Sorghum	cytosol	88.18	84.04
Os07t0659900-01	Rice	cytosol	78.82	75.83
Zm00001d029202_P001	Maize	cytosol	67.49	69.19
GSMUA_Achr8P22080_001	Banana	cytosol	60.1	61.93
GSMUA_Achr8P09670_001	Banana	cytosol	57.14	56.59
Zm00001d012471_P001	Maize	cytosol, plastid	23.65	41.74
Zm00001d026424_P001	Maize	cytosol	25.62	41.6
Zm00001d010509_P001	Maize	mitochondrion	42.86	35.22
Zm00001d038018_P001	Maize	mitochondrion	40.39	34.31
Zm00001d012904_P001	Maize	cytosol	20.69	33.87
Zm00001d010594_P001	Maize	plastid	40.39	32.93
Zm00001d007885_P001	Maize	mitochondrion	35.47	32.14
Zm00001d038445_P001	Maize	cytosol	40.89	29.96
Zm00001d043006_P001	Maize	plastid	39.9	28.03
Zm00001d018827_P001	Maize	mitochondrion	35.96	27.14
Zm00001d054094_P001	Maize	cytosol	40.39	26.28
Zm00001d027853_P001	Maize	plastid	39.9	24.85
Zm00001d033205_P001	Maize	mitochondrion	41.38	24.28
Zm00001d013668_P001	Maize	mitochondrion	41.38	24.0
Zm00001d024469_P001	Maize	cytosol, plastid	41.87	23.16
Zm00001d018058_P001	Maize	plastid	41.38	22.28
Zm00001d052252_P001	Maize	mitochondrion	38.92	21.47
Zm00001d002123_P001	Maize	plastid	42.36	20.28
Zm00001d044841_P001	Maize	plastid	41.38	19.22
Zm00001d037218_P001	Maize	plastid	39.9	18.93
Zm00001d039270_P001	Maize	cytosol	34.98	17.88
Zm00001d003779_P001	Maize	cytosol	37.44	17.0

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A1D6IM75	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	ProteinID:ONM60410.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF194
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000221F44C	EnsemblPlantsGene:Zm00001d022403	EnsemblPlants:Zm00001d022403_P001	EnsemblPlants:Zm00001d022403_T001
SEG:seg	:	:	:	:	:

Description

Glutaredoxin family protein

Coordinates

chr7:-:176841474..176842085

Molecular Weight (calculated)

22055.5 Da

IEP (calculated)

8.957

GRAVY (calculated)

-0.281

Length

203 amino acids

Sequence
(BLAST)

001: MDDCGGGGGK RPFQLARSLT YHHHPGHRPA AASRWRRQHQ QHQLADEPRA PRPQAVVLYT TSLRGVRRTF ADCAAVRAIL RGFRVAVDER DVSMDAALRR
101: EVQALLAARG RAFALPQLLI GGRLVGGADE VRQLNETGQL RRLLDGAAGQ DPAFVCDACG GVRFVPCAGC GGGRKVFVEE EGRVVRCVEC NENGLVRCLN
201: CCS

Best Arabidopsis Sequence Match ( AT5G13810.1 )
(BLAST)

001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS

Arabidopsis Description

AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.