Factsheet for Zm00001d043006_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006417_P002
Zm00001d021532_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	Zm00001d006417_P002	AT1G30860.1	21798944
AT5G58530.1	Zm00001d021532_P001	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33640	Sorghum	mitochondrion	83.39	90.94
Zm00001d012471_P001	Maize	cytosol, plastid	34.6	86.96
Os01t0829400-01	Rice	mitochondrion	73.01	82.75
TraesCS3A01G349200.1	Wheat	plastid	69.2	80.65
TraesCS3D01G343100.1	Wheat	plastid	69.2	79.68
HORVU3Hr1G087930.1	Barley	plastid	68.17	79.44
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	68.17	79.12
Os10t0343900-01	Rice	cytosol	30.1	65.91
Zm00001d010594_P001	Maize	plastid	55.36	64.26
GSMUA_Achr5P29410_001	Banana	mitochondrion	46.71	58.44
Zm00001d038445_P001	Maize	cytosol	55.36	57.76
GSMUA_Achr5P14280_001	Banana	plastid	45.33	57.21
GSMUA_Achr4P18760_001	Banana	plastid	44.29	54.24
GSMUA_Achr6P32840_001	Banana	cytosol	41.52	51.5
Zm00001d038018_P001	Maize	mitochondrion	41.18	49.79
GSMUA_Achr7P18270_001	Banana	mitochondrion	44.29	49.23
Zm00001d010509_P001	Maize	mitochondrion	41.87	48.99
GSMUA_Achr6P23380_001	Banana	mitochondrion	39.45	48.51
CDX74801	Canola	cytosol	25.61	44.31
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	37.72	44.31
KRH14919	Soybean	plastid	36.68	43.8
Zm00001d029202_P001	Maize	cytosol	29.76	43.43
KRH31178	Soybean	plastid	33.91	42.79
HORVU7Hr1G076170.1	Barley	plastid	32.87	42.79
Bra002640.1-P	Field mustard	cytosol	17.3	42.37
KRG97693	Soybean	plastid	33.56	42.36
KRH30192	Soybean	plastid	33.56	41.99
PGSC0003DMT400078241	Potato	cytosol, plastid	34.6	41.67
KRG98239	Soybean	plastid	33.91	41.53
Solyc06g082180.1.1	Tomato	cytosol, plastid	35.99	40.94
PGSC0003DMT400078242	Potato	cytosol, plastid	35.99	40.94
Zm00001d022403_P001	Maize	cytosol, plastid	28.03	39.9
Bra020363.1-P	Field mustard	cytosol, plastid	33.91	38.89
CDY59509	Canola	cytosol, plastid	33.91	38.89
CDY32696	Canola	cytosol, plastid	32.87	37.85
Zm00001d026424_P001	Maize	cytosol	16.26	37.6
KRH73271	Soybean	plastid	38.06	36.54
CDY18861	Canola	mitochondrion	30.8	36.18
KRH72724	Soybean	plastid	34.95	35.94
CDY32794	Canola	peroxisome	32.18	35.91
Bra004972.1-P	Field mustard	mitochondrion	30.45	35.63
VIT_13s0067g01650.t01	Wine grape	plastid	35.99	35.37
CDX74802	Canola	cytosol, mitochondrion	30.1	35.22
AT5G58530.1	Thale cress	cytosol, plastid	33.22	35.16
KRH17081	Soybean	plastid	35.29	33.77
Bra004971.1-P	Field mustard	plastid	29.41	33.6
Zm00001d012904_P001	Maize	cytosol	13.84	32.26
Zm00001d007885_P001	Maize	mitochondrion	22.49	29.02
Zm00001d018827_P001	Maize	mitochondrion	23.18	24.91
Zm00001d013668_P001	Maize	mitochondrion	29.07	24.0
Zm00001d027853_P001	Maize	plastid	26.99	23.93
Zm00001d018058_P001	Maize	plastid	31.14	23.87
Zm00001d052252_P001	Maize	mitochondrion	30.1	23.64
Solyc06g082170.2.1	Tomato	cytosol, plastid	33.91	23.61
Zm00001d033205_P001	Maize	mitochondrion	28.03	23.41
Zm00001d054094_P001	Maize	cytosol	24.57	22.76
Zm00001d024469_P001	Maize	cytosol, plastid	28.72	22.62
Zm00001d037218_P001	Maize	plastid	30.45	20.56
Zm00001d044841_P001	Maize	plastid	30.45	20.14
Zm00001d002123_P001	Maize	plastid	29.41	20.05
Zm00001d039270_P001	Maize	cytosol	23.18	16.88
Zm00001d003779_P001	Maize	cytosol	25.95	16.78

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A1D6N7Y8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	ProteinID:ONM36700.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF75
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00022102B9	EnsemblPlantsGene:Zm00001d043006	EnsemblPlants:Zm00001d043006_P001	EnsemblPlants:Zm00001d043006_T001
SEG:seg	:	:	:	:	:

Description

Glutaredoxin family protein

Coordinates

chr3:-:186282968..186284078

Molecular Weight (calculated)

30565.7 Da

IEP (calculated)

9.881

GRAVY (calculated)

-0.049

Length

289 amino acids

Sequence
(BLAST)

001: MSACFLPSAP DLKIEQIPAS SSLSPTSART PPLMWLPWVK TRPSSATSTS NSPSTALVAA ASPRLSFSSP SLKDLQALLL SDAATPSPPP AAPCSPSSSV
101: RVFHRVRVAA SALRALRTLQ APPSSGGGAA FEADRRVVLY FTSLHVVRST YEDCRAVRAI LRGLRVAVDE RDLAMDTRYF QELAALLPRP VAPRRVTLPQ
201: VFVGGRHLGG ADEVRRLHEA GELRRVVAGA VAASLATCGR CGGERYVLCG SCNGSHKRYS AKGGSGFRTC AVCNENGLVR CPDCSPPDV

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.