Factsheet for GSMUA_Achr6P23380_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P33210_001
GSMUA_Achr7P00390_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58530.1	GSMUA_Achr4P33210_001	AT1G30860.1	21798944
AT5G58530.1	GSMUA_Achr7P00390_001	AT1G30860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P18270_001	Banana	mitochondrion	67.66	61.15
GSMUA_Achr6P32840_001	Banana	cytosol	55.32	55.79
Zm00001d012471_P001	Maize	cytosol, plastid	26.38	53.91
GSMUA_Achr5P29410_001	Banana	mitochondrion	48.09	48.92
Bra002640.1-P	Field mustard	cytosol	24.26	48.31
GSMUA_Achr8P22080_001	Banana	cytosol	39.15	46.7
TraesCS3A01G349200.1	Wheat	plastid	48.94	46.37
TraesCS3D01G343100.1	Wheat	plastid	48.94	45.82
TraesCS3B01G381400.1	Wheat	mitochondrion, plastid	48.51	45.78
Os01t0829400-01	Rice	mitochondrion	49.36	45.49
PGSC0003DMT400078241	Potato	cytosol, plastid	46.38	45.42
GSMUA_Achr5P14280_001	Banana	plastid	43.83	44.98
GSMUA_Achr4P18760_001	Banana	plastid	45.11	44.92
HORVU3Hr1G087930.1	Barley	plastid	47.23	44.76
KXG33640	Sorghum	mitochondrion	49.36	43.77
Solyc06g082180.1.1	Tomato	cytosol, plastid	47.23	43.7
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	45.53	43.5
Zm00001d010594_P001	Maize	plastid	45.96	43.37
PGSC0003DMT400078242	Potato	cytosol, plastid	46.81	43.31
KRH30192	Soybean	plastid	42.55	43.29
Os05t0471350-00	Rice	mitochondrion, plastid	47.23	43.19
EES19677	Sorghum	plastid	48.09	42.8
CDX74801	Canola	cytosol	30.21	42.52
KRH14919	Soybean	plastid	42.98	41.74
EES18035	Sorghum	mitochondrion	42.55	41.67
KRG98239	Soybean	plastid	41.7	41.53
KRH31178	Soybean	plastid	40.43	41.48
GSMUA_Achr8P09670_001	Banana	cytosol	36.17	41.46
TraesCS1D01G224200.1	Wheat	mitochondrion	40.43	41.13
TraesCS1A01G222600.1	Wheat	mitochondrion	40.0	40.69
TraesCS1B01G235900.1	Wheat	mitochondrion	40.0	40.69
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	41.7	40.66
CDY32696	Canola	cytosol, plastid	43.4	40.64
KRG97693	Soybean	plastid	39.57	40.61
Zm00001d010509_P001	Maize	mitochondrion	42.55	40.49
Bra020363.1-P	Field mustard	cytosol, plastid	42.98	40.08
CDY59509	Canola	cytosol, plastid	42.55	39.68
Zm00001d043006_P001	Maize	plastid	48.51	39.45
Zm00001d038018_P001	Maize	mitochondrion	39.57	38.91
Os10t0343900-01	Rice	cytosol	21.7	38.64
CDY32794	Canola	peroxisome	42.55	38.61
Zm00001d038445_P001	Maize	cytosol	44.68	37.91
TraesCS1B01G305600.1	Wheat	mitochondrion, plastid	40.43	37.85
TraesCS1A01G296500.1	Wheat	mitochondrion	40.43	37.55
HORVU1Hr1G070570.1	Barley	plastid	41.28	37.16
VIT_13s0067g01650.t01	Wine grape	plastid	46.38	37.07
TraesCS1D01G294800.1	Wheat	plastid	39.57	37.05
KRH72724	Soybean	plastid	44.26	37.01
AT5G58530.1	Thale cress	cytosol, plastid	41.7	35.9
KRH17081	Soybean	plastid	45.53	35.43
CDY18861	Canola	mitochondrion	37.02	35.37
Bra004972.1-P	Field mustard	mitochondrion	36.6	34.82
CDX74802	Canola	cytosol, mitochondrion	36.17	34.41
OQU81447	Sorghum	plastid	27.66	34.39
KRH73271	Soybean	plastid	43.4	33.89
HORVU7Hr1G076170.1	Barley	plastid	31.06	32.88
Bra004971.1-P	Field mustard	plastid	35.32	32.81
Os05t0353600-00	Rice	plastid	45.53	31.94
Solyc06g082170.2.1	Tomato	cytosol, plastid	44.68	25.3
GSMUA_Achr3P01620_001	Banana	mitochondrion	36.17	24.08
GSMUA_Achr8P24180_001	Banana	cytosol	34.47	23.21
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	28.51	22.41
GSMUA_Achr4P00540_001	Banana	mitochondrion	37.45	22.39
GSMUA_Achr2P20360_001	Banana	cytosol	25.53	21.82
GSMUA_Achr6P13210_001	Banana	cytosol	25.53	21.74
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	30.64	17.82
GSMUA_Achr10P...	Banana	cytosol	28.09	17.74
GSMUA_Achr6P18300_001	Banana	cytosol	27.23	16.41
GSMUA_Achr9P02540_001	Banana	cytosol	25.96	15.56

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G23380_001	EnsemblPlants:GSMUA_Achr6P23380_001
EnsemblPlants:GSMUA_Achr6T23380_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0T9I6	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF182	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002952739	SEG:seg

Description

glutaredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G23380_001]

Coordinates

chr6:+:23585037..23585834

Molecular Weight (calculated)

25649.8 Da

IEP (calculated)

9.060

GRAVY (calculated)

-0.304

Length

235 amino acids

Sequence
(BLAST)

001: MWSPWRKLRL PRRGAASPTP PPPLLPPPPS SFLRSSSSFK DVRSLLGDDD TDDPSTTPYW ASLSPSPSPS PSPSPMLSPA PKRIVLYYTS LRVVRQTFDD
101: CADVRTILRG LRVAVDERDV SLDAAFMREL KGILGGRRKP LGLPQVFIGG RHFGGAEEIR RLYETGELKR YVEGAAPAVV GVCEGCGDFR FVLCRSCSGS
201: RRCYSEKGGG GFRTCTACNE NGLVRCPLCC AHTTV

Best Arabidopsis Sequence Match ( AT5G58530.1 )
(BLAST)

001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP

Arabidopsis Description

At5g58530 [Source:UniProtKB/TrEMBL;Acc:Q9FGG8]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.