Factsheet for GSMUA_Achr7P20960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P00540_001	Banana	mitochondrion	63.86	65.65
GSMUA_Achr8P24180_001	Banana	cytosol	48.27	55.87
CDY00113	Canola	cytosol	15.35	46.62
GSMUA_Achr3P01620_001	Banana	mitochondrion	37.13	42.49
GSMUA_Achr8P22080_001	Banana	cytosol	18.32	37.56
Bra033062.1-P	Field mustard	cytosol	30.2	36.2
CDY04039	Canola	cytosol	30.2	36.2
GSMUA_Achr8P09670_001	Banana	cytosol	18.32	36.1
CDY70277	Canola	cytosol	29.95	35.91
GSMUA_Achr5P29410_001	Banana	mitochondrion	20.05	35.06
CDY67051	Canola	cytosol	32.67	34.83
CDY30281	Canola	cytosol	32.92	34.46
PGSC0003DMT400017853	Potato	cytosol	26.98	33.75
CDY20015	Canola	cytosol	33.42	33.42
PGSC0003DMT400003335	Potato	cytosol	34.65	33.41
CDX86410	Canola	cytosol	33.91	33.33
CDX85224	Canola	cytosol	34.16	33.33
Bra025357.1-P	Field mustard	cytosol	33.91	33.33
Bra039044.1-P	Field mustard	cytosol	34.65	33.18
Solyc02g087850.1.1	Tomato	cytosol, plastid	34.41	33.17
PGSC0003DMT400056766	Potato	cytosol	32.43	33.0
GSMUA_Achr6P13210_001	Banana	cytosol	22.52	32.97
Bra025638.1-P	Field mustard	cytosol	33.42	32.93
AT5G39865.1	Thale cress	cytosol, mitochondrion	31.44	32.56
AT3G28850.1	Thale cress	cytosol	34.16	32.24
GSMUA_Achr2P20360_001	Banana	cytosol	21.78	32.0
GSMUA_Achr5P14280_001	Banana	plastid	17.82	31.44
KRH40113	Soybean	cytosol, mitochondrion	35.4	31.22
KRH01158	Soybean	cytosol	35.64	31.03
GSMUA_Achr4P18760_001	Banana	plastid	18.07	30.93
GSMUA_Achr6P32840_001	Banana	cytosol	17.82	30.9
GSMUA_Achr7P18270_001	Banana	mitochondrion	19.8	30.77
GSMUA_Achr6P23380_001	Banana	mitochondrion	17.82	30.64
Solyc02g067400.1.1	Tomato	cytosol	21.29	30.28
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	33.66	30.22
KRG93517	Soybean	cytosol	31.44	29.06
GSMUA_Achr6P18300_001	Banana	cytosol	24.5	25.38
GSMUA_Achr9P02540_001	Banana	cytosol	24.01	24.74
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	17.57	23.75
GSMUA_Achr10P...	Banana	cytosol	17.57	19.09

Protein Annotations

EnsemblPlants:GSMUA_Achr7P20960_001	EnsemblPlants:GSMUA_Achr7T20960_001	EnsemblPlantsGene:GSMUA_Achr7G20960_001	Gene3D:3.40.30.10	InterPro:Thioredoxin-like_sf	PANTHER:PTHR10168
PANTHER:PTHR10168:SF80	SEG:seg	SUPFAM:SSF52833	UniParc:UPI000295FEC7	UniProt:M0TJD3	MapMan:35.1

Description

Putative Uncharacterized protein At5g39865 [Source:GMGC_GENE;Acc:GSMUA_Achr7G20960_001]

Coordinates

chr7:+:23877640..23879490

Molecular Weight (calculated)

44502.7 Da

IEP (calculated)

5.001

GRAVY (calculated)

-0.679

Length

404 amino acids

Sequence
(BLAST)

001: MGCTGSKQLR RDSGRSPSPY SRSHSLPIRY AGVAGGRSGD GHNAVVLSST TLGSLVLDRG DLSSDDETMI TDRRIPKTPT MTPPDDPEVI NAWELMAGLE
101: DASPLNLPPP AALDRSSSSH TSHDSRDSVI YDFDPEILSS FRQALDELSP QRQSYSIDQP IEPDNEEEVE EPSHARRRTV EPAERPHHQS NSIYQLPEPE
201: EEEEVEKKLS HPRTRTAESV DSRQVPTHTS IVRARINEFQ RKIDARKTNI NANSAKVAPS SKCPPGGEGK VVLYFTSLRG IRKTFEDCWA EELIDILGPV
301: YGGHRLPRIF ADGNYLGGAE EVRHLHEAAR LGKFLECCET MPSRGKGGSV ISSCEGCGDV RFVPCETCSG SCKVYVEEEE DDVGGFRRCS DCNENGLVRC
401: SLCC

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.