Factsheet for PGSC0003DMT400056766

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00113	Canola	cytosol	20.91	62.41
PGSC0003DMT400003335	Potato	cytosol	64.74	61.34
PGSC0003DMT400017853	Potato	cytosol	47.36	58.2
Bra033062.1-P	Field mustard	cytosol	44.58	52.52
CDY70277	Canola	cytosol	44.58	52.52
CDY04039	Canola	cytosol	44.33	52.23
CDY30281	Canola	cytosol	49.12	50.52
CDY67051	Canola	cytosol	48.11	50.4
KRH40113	Soybean	cytosol, mitochondrion	55.67	48.25
Bra025638.1-P	Field mustard	cytosol	49.62	48.05
Zm00001d026424_P001	Maize	cytosol	15.11	48.0
CDX86410	Canola	cytosol	49.37	47.69
Bra025357.1-P	Field mustard	cytosol	49.37	47.69
KRH01158	Soybean	cytosol	55.67	47.63
CDX85224	Canola	cytosol	49.62	47.58
CDY20015	Canola	cytosol	48.36	47.52
AT3G28850.1	Thale cress	cytosol	50.88	47.2
AT5G39865.1	Thale cress	cytosol, mitochondrion	45.84	46.67
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	52.9	46.67
Bra039044.1-P	Field mustard	cytosol	49.37	46.45
KRG93517	Soybean	cytosol	48.61	44.16
GSMUA_Achr3P01620_001	Banana	mitochondrion	38.29	43.06
Zm00001d027853_P001	Maize	plastid	32.75	39.88
GSMUA_Achr8P24180_001	Banana	cytosol	35.01	39.83
HORVU4Hr1G075190.2	Barley	mitochondrion	32.75	39.76
TraesCS4D01G286300.1	Wheat	mitochondrion	32.24	39.26
TraesCS4B01G287700.1	Wheat	mitochondrion	32.24	39.02
Os03t0170800-00	Rice	mitochondrion	31.49	38.82
TraesCS4A01G016500.1	Wheat	mitochondrion	32.24	38.79
EER95421	Sorghum	mitochondrion, plastid	32.49	38.39
GSMUA_Achr4P00540_001	Banana	mitochondrion	37.53	37.91
Os02t0748800-00	Rice	cytosol, mitochondrion	34.76	37.4
PGSC0003DMT400078241	Potato	cytosol, plastid	22.17	36.67
Zm00001d052252_P001	Maize	mitochondrion	33.75	36.41
EES05526	Sorghum	mitochondrion	34.76	36.32
Zm00001d018058_P001	Maize	plastid	34.26	36.07
TraesCS6A01G305800.1	Wheat	mitochondrion	34.26	35.32
PGSC0003DMT400078242	Potato	cytosol, plastid	22.42	35.04
TraesCS6D01G285000.1	Wheat	mitochondrion	33.25	34.92
PGSC0003DMT400047487	Potato	cytosol	23.17	34.85
TraesCS6B01G334000.1	Wheat	mitochondrion	33.5	34.82
HORVU0Hr1G017160.1	Barley	mitochondrion	33.25	34.74
Zm00001d002123_P001	Maize	plastid	35.01	32.78
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	33.0	32.43
PGSC0003DMT400031889	Potato	plastid	25.19	31.95
PGSC0003DMT400007648	Potato	cytosol	30.98	31.06
PGSC0003DMT400015465	Potato	cytosol	21.41	31.02
Os06t0226100-00	Rice	plastid	29.72	30.81
Os04t0641300-01	Rice	cytosol, plastid	34.26	30.7
HORVU7Hr1G038000.2	Barley	cytosol, plastid	30.98	29.08
HORVU2Hr1G115200.2	Barley	cytosol	33.75	29.07
TraesCS2A01G521700.1	Wheat	plastid	33.5	29.04
TraesCS2B01G551200.1	Wheat	cytosol, plastid	33.5	29.04
TraesCS2D01G523500.1	Wheat	plastid	33.0	28.6
Zm00001d037218_P001	Maize	plastid	30.73	28.5
OQU82428	Sorghum	cytosol, plastid	35.26	28.17
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	32.24	28.13
Zm00001d044841_P001	Maize	plastid	30.73	27.92
PGSC0003DMT400020985	Potato	cytosol, plastid	30.23	27.65
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	16.88	27.46
TraesCS7B01G090200.1	Wheat	cytosol, plastid	31.99	27.19
EER88108	Sorghum	plastid	31.23	27.19
Zm00001d024469_P001	Maize	cytosol, plastid	24.69	26.7
TraesCS3D01G334100.1	Wheat	plastid	27.46	26.59
PGSC0003DMT400023120	Potato	cytosol	26.7	26.5
TraesCS3B01G372200.1	Wheat	plastid	27.2	26.28
TraesCS3A01G340600.1	Wheat	plastid	26.95	26.1
EES14625	Sorghum	cytosol, plastid	26.45	25.93
TraesCS7D01G186600.1	Wheat	plastid	32.24	25.45
PGSC0003DMT400031969	Potato	cytosol	23.68	24.04
PGSC0003DMT400005022	Potato	cytosol	22.17	23.98
Os08t0171333-00	Rice	plastid	16.88	21.2

Protein Annotations

EntrezGene:102603477	Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:M1BZV4	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG400022074	PGSC:PGSC0003DMG400022074	EnsemblPlants:PGSC0003DMT400056766
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295D095
RefSeq:XP_006364146.1	SEG:seg	:	:	:	:

Description

Electron transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400022074]

Coordinates

chr00:+:14345266..14346804

Molecular Weight (calculated)

44749.9 Da

IEP (calculated)

5.007

GRAVY (calculated)

-0.617

Length

397 amino acids

Sequence
(BLAST)

001: MGCATSKPKV CQNCHTPYSP VRRSYSMYIP KKKGINDESE QQHRVNLTSS TLGSLKLDSM NLSQSLRNDH FAFEIDDYNA EKDGLLIEAR TWSQLINHKI
101: PKVVVVPMTQ VRTPPGEPET INAWELVEGL EDITPLKPSD HHHQHTFSFP ISPNENLPNM ADNESSLHSN GTSIVSDFDP EVINKFRKAL EELPPANPFY
201: LKPLVNQDTK GLDDESESVT TEYKLVHHEK DKLVIYFTSL RGVRKTYEDC CHVRVILKGL GVKVDERDIS MHSGFKEELK ELLGKENARG GLPRVFLGKK
301: YTGGADEIRK MNEDGKLEKL VENCERQEDG GGSVIENGVC EACGDIRFVP CETCSGSCKI YCEVEYGELE LEENEYGFQR CPDCNENGLI RCPICCD

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.