CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037218_P001	Maize	plastid	74.78	79.67
Os06t0226100-00	Rice	plastid	51.54	61.36
EES05526	Sorghum	mitochondrion	48.9	58.68
HORVU7Hr1G038000.2	Barley	cytosol, plastid	53.29	57.45
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	53.51	53.63
TraesCS7B01G090200.1	Wheat	cytosol, plastid	53.51	52.25
TraesCS7D01G186600.1	Wheat	plastid	54.17	49.11
EER95421	Sorghum	mitochondrion, plastid	31.8	43.15
CDY00113	Canola	cytosol	12.5	42.86
EER94843	Sorghum	cytosol	17.98	40.39
KXG36862	Sorghum	cytosol	17.54	37.56
EES18035	Sorghum	mitochondrion	19.3	36.67
EES19677	Sorghum	plastid	21.05	36.36
EES14625	Sorghum	cytosol, plastid	31.36	35.31
PGSC0003DMT400017853	Potato	cytosol	25.0	35.29
KXG33640	Sorghum	mitochondrion	19.96	34.34
OQU82428	Sorghum	cytosol, plastid	37.28	34.21
CDY04039	Canola	cytosol	25.22	34.12
CDY70277	Canola	cytosol	24.78	33.53
Bra033062.1-P	Field mustard	cytosol	24.78	33.53
KXG29248	Sorghum	cytosol	23.25	32.22
CDY67051	Canola	cytosol	26.54	31.93
CDY30281	Canola	cytosol	26.54	31.35
PGSC0003DMT400056766	Potato	cytosol	27.19	31.23
EER95886	Sorghum	mitochondrion	18.42	30.66
Solyc02g067400.1.1	Tomato	cytosol	19.08	30.63
PGSC0003DMT400003335	Potato	cytosol	28.07	30.55
AT5G39865.1	Thale cress	cytosol, mitochondrion	26.1	30.51
CDY20015	Canola	cytosol	26.97	30.45
AT3G28850.1	Thale cress	cytosol	28.51	30.37
Solyc02g087850.1.1	Tomato	cytosol, plastid	27.85	30.31
Bra025638.1-P	Field mustard	cytosol	27.19	30.24
Bra025357.1-P	Field mustard	cytosol	27.19	30.17
CDX86410	Canola	cytosol	27.19	30.17
Bra039044.1-P	Field mustard	cytosol	27.85	30.09
CDX85224	Canola	cytosol	26.97	29.71
OQU81447	Sorghum	plastid	12.28	29.63
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	29.17	29.56
KRH40113	Soybean	cytosol, mitochondrion	28.95	28.82
KRH01158	Soybean	cytosol	28.73	28.23
KRG93517	Soybean	cytosol	26.1	27.23
EER91159	Sorghum	mitochondrion	20.39	26.12
EES10743	Sorghum	cytosol	24.56	24.83
KXG31460	Sorghum	cytosol	18.2	20.75

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8065518	UniProt:C5Z720	EnsemblPlants:EER88108	ProteinID:EER88108
ProteinID:EER88108.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF91	EnsemblPlantsGene:SORBI_3010G091600	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A8937B	RefSeq:XP_002436741.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:8034887..8037651

Molecular Weight (calculated)

47495.1 Da

IEP (calculated)

5.926

GRAVY (calculated)

-0.350

Length

456 amino acids

Sequence
(BLAST)

001: MGCKGSKHAL HGGCGGLAAA RPTEPQQRRS SGRLQAPPPR HSVALRSSTL GTLSLDRAVA AVAAAGALSF DATAAGGGDE GMMKAGNDVV ADSGAGTMTK
101: LLLGPSSRSF GACWCPTTPP PVAAPPPPKR QKRVVAAASR AVAPRTPNKT PAHDPEEINV WELMKGLDDD DDYEEEEDEE TDGGGCVVHG AGVVERKKAQ
201: SAPGSPLVFD PELLDAFRKA LDDLTPAPDS PPLPADFVKR DGGGGDDAVE KRAQIQTFPG IVRARVDVFQ EKINAKTKKL AKKASPPPPP ESAGRVVVYL
301: TSLRGIRQTY EDCWSTSAIL RGYGVRVDER DLSMHAGFKD ELRAAALGDE GRLPMLPQVF ADGRHLGGAE EVRRLHEAGE LASALAACDA AAPPCAATKG
401: GALQDACCAG CGGVRFVPCD GCSGSCKVFV EDEDSGGAFR RCPECNENGL VKCPVC

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.