CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029202_P001	Maize	cytosol	91.13	93.43
Os03t0356400-01	Rice	cytosol	76.85	76.85
TraesCS4A01G148500.1	Wheat	cytosol	70.94	70.59
TraesCS2B01G150900.1	Wheat	cytosol	68.97	67.96
TraesCS2D01G131300.1	Wheat	cytosol	69.46	67.79
GSMUA_Achr8P22080_001	Banana	cytosol	62.56	64.47
HORVU7Hr1G043870.1	Barley	cytosol	24.14	63.64
KXG36862	Sorghum	cytosol	64.04	61.03
GSMUA_Achr8P09670_001	Banana	cytosol	54.19	53.66
EES18035	Sorghum	mitochondrion	44.83	37.92
EES19677	Sorghum	plastid	44.34	34.09
KXG33640	Sorghum	mitochondrion	42.86	32.83
OQU81447	Sorghum	plastid	27.09	29.1
EER95886	Sorghum	mitochondrion	38.42	28.47
EER95421	Sorghum	mitochondrion, plastid	43.84	26.49
KXG29248	Sorghum	cytosol	39.9	24.62
EES14625	Sorghum	cytosol, plastid	43.84	21.98
EES05526	Sorghum	mitochondrion	40.39	21.58
EER91159	Sorghum	mitochondrion	35.47	20.22
EER88108	Sorghum	plastid	40.39	17.98
EES10743	Sorghum	cytosol	39.41	17.74
OQU82428	Sorghum	cytosol, plastid	42.86	17.5
KXG31460	Sorghum	cytosol	33.99	17.25

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8082639	UniProt:C5WZQ3	EnsemblPlants:EER94843	ProteinID:EER94843
ProteinID:EER94843.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF194	EnsemblPlantsGene:SORBI_3001G368400	SUPFAM:SSF52833	unigene:Sbi.4952
InterPro:Thioredoxin-like_sf	UniParc:UPI0001A8343E	RefSeq:XP_002467845.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:65724754..65726537

Molecular Weight (calculated)

21926.4 Da

IEP (calculated)

8.834

GRAVY (calculated)

-0.401

Length

203 amino acids

Sequence
(BLAST)

001: MDDVSGGAPG SACPKNKKPR HLSRSLTYHH HHPYQGRHLP PPPSPAPTPP QRPQSVVLYT TSLRGVRRTF ADCCAVRAAL RGLRVAVDER DVSMDAALRR
101: ELQGVLAARG RGFSLPQLLV GGVLVGGADE VRRLHESGEL RRILEGAPGQ DPAFVCGACG GFRFAPCPAC DGSRKVFVEE EGRPRRCIEC NENGLVRCPN
201: CCS

Best Arabidopsis Sequence Match ( AT5G13810.1 )
(BLAST)

001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS

Arabidopsis Description

AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.