CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003779_P001	Maize	cytosol	90.69	91.5
Os04t0412800-01	Rice	cytosol, plastid	83.59	84.15
HORVU2Hr1G073040.1	Barley	cytosol	78.05	83.81
TraesCS2B01G311500.1	Wheat	mitochondrion	77.83	83.18
TraesCS2D01G292800.1	Wheat	mitochondrion	77.83	82.78
TraesCS2A01G295000.1	Wheat	mitochondrion	77.83	82.78
Bra005786.1-P	Field mustard	cytosol	13.53	55.96
CDY11274	Canola	cytosol	13.53	55.96
CDX80893	Canola	cytosol	12.86	53.21
GSMUA_Achr2P20360_001	Banana	cytosol	31.04	50.91
CDY14169	Canola	cytosol	25.94	47.76
KXG29248	Sorghum	cytosol	32.37	44.38
VIT_08s0007g03220.t01	Wine grape	cytosol	38.36	43.47
Solyc09g009860.1.1	Tomato	cytosol	37.69	42.61
PGSC0003DMT400023120	Potato	cytosol	37.47	42.25
CDY04902	Canola	nucleus	32.15	41.79
Bra028812.1-P	Field mustard	nucleus	32.15	41.55
EER94843	Sorghum	cytosol	17.74	39.41
AT5G03870.1	Thale cress	cytosol	32.82	38.54
KRH67928	Soybean	cytosol	37.25	36.68
KXG36862	Sorghum	cytosol	17.07	36.15
EER95886	Sorghum	mitochondrion	21.73	35.77
CDX80894	Canola	nucleus	14.19	32.65
EES18035	Sorghum	mitochondrion	17.07	32.08
CDY11275	Canola	nucleus	13.75	31.31
EER95421	Sorghum	mitochondrion, plastid	22.39	30.06
EES05526	Sorghum	mitochondrion	25.28	30.0
EES19677	Sorghum	plastid	17.29	29.55
EER91159	Sorghum	mitochondrion	23.06	29.21
KXG33640	Sorghum	mitochondrion	16.85	28.68
KXG31460	Sorghum	cytosol	22.17	25.0
EER88108	Sorghum	plastid	24.83	24.56
OQU81447	Sorghum	plastid	9.98	23.81
EES14625	Sorghum	cytosol, plastid	20.84	23.21
OQU82428	Sorghum	cytosol, plastid	23.73	21.53

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	EntrezGene:8072970	UniProt:C5YFV5	EnsemblPlants:EES10743	ProteinID:EES10743
ProteinID:EES10743.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009506	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF189	EnsemblPlantsGene:SORBI_3006G069500	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0001A86F07	RefSeq:XP_002446415.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:43250944..43252930

Molecular Weight (calculated)

47767.4 Da

IEP (calculated)

9.872

GRAVY (calculated)

-0.471

Length

451 amino acids

Sequence
(BLAST)

001: MGCISSKLLP PGPGGDGGRR ATVRGRVEHV VSLTSTTYGV LDLHPKHGGG AVLAAAAADA GEVEKEEPPP PPQDKPISKE WKRASMRPPP IAVPSADKKP
101: AAGKPESGLE VINAWEIMAG LEEAYAAAAV AGSPPAKKPS KPGRWSPARV IAMALPSPKR SATRRKNTPG KENSPLQRCS GNLTSKDKDK DKTAGDVDGD
201: RVLRPYNSID NSKLSMASKR FSPGSARIVR KPGTAETGGG GGTGMSSSRR SLSPLFDPEL LASIERELSE EGAHIKRMVG SEKPKHPKAA PPAIVAAEGK
301: CPPGGAEAVV LYTTTLRGIR RTFEECNAVR AAIEAHDVKV IERDVSMDSG YREELRLLLG GREVRVPAVF VRGRHVGGAA EVAKLEEEGK LKALLEGLPR
401: ARVWCAGCAG VRFVMCRDCN GSRKVLDAER KETVKCGECN ENGLVRCPIC S

Best Arabidopsis Sequence Match ( AT5G03870.1 )
(BLAST)

001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.