Factsheet for TraesCS2D01G292800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G295000.1	Wheat	mitochondrion	97.64	97.64
TraesCS2B01G311500.1	Wheat	mitochondrion	97.17	97.63
HORVU2Hr1G073040.1	Barley	cytosol	95.52	96.43
Os04t0412800-01	Rice	cytosol, plastid	85.61	81.03
EES10743	Sorghum	cytosol	82.78	77.83
Zm00001d003779_P001	Maize	cytosol	81.84	77.63
Bra005786.1-P	Field mustard	cytosol	13.44	52.29
CDY11274	Canola	cytosol	13.44	52.29
GSMUA_Achr2P20360_001	Banana	cytosol	32.55	50.18
CDX80893	Canola	cytosol	12.74	49.54
CDY14169	Canola	cytosol	27.59	47.76
TraesCS1D01G095500.1	Wheat	cytosol	33.73	46.58
CDY04902	Canola	nucleus	34.43	42.07
Bra028812.1-P	Field mustard	nucleus	34.43	41.83
VIT_08s0007g03220.t01	Wine grape	cytosol	39.15	41.71
Solyc09g009860.1.1	Tomato	cytosol	37.97	40.35
PGSC0003DMT400023120	Potato	cytosol	37.97	40.25
AT5G03870.1	Thale cress	cytosol	35.61	39.32
TraesCS2D01G131300.1	Wheat	cytosol	17.92	36.54
TraesCS2D01G250600.1	Wheat	mitochondrion	23.11	36.3
KRH67928	Soybean	cytosol	37.26	34.5
CDX80894	Canola	nucleus	15.57	33.67
CDY11275	Canola	nucleus	15.33	32.83
TraesCS5D01G381700.1	Wheat	mitochondrion	23.11	30.43
TraesCS4D01G286300.1	Wheat	mitochondrion	22.17	28.83
TraesCS3D01G343100.1	Wheat	plastid	16.98	28.69
TraesCS6D01G285000.1	Wheat	mitochondrion	25.47	28.57
TraesCS1D01G224200.1	Wheat	mitochondrion	15.57	28.57
TraesCS1D01G294800.1	Wheat	plastid	15.33	25.9
TraesCS3D01G166500.1	Wheat	cytosol	23.82	25.06
TraesCS7D01G186600.1	Wheat	plastid	26.65	22.47
TraesCS2D01G523500.1	Wheat	plastid	23.35	21.62
TraesCS3D01G334100.1	Wheat	plastid	20.05	20.73

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF189	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
EnsemblPlantsGene:TraesCS2D01G292800	EnsemblPlants:TraesCS2D01G292800.1	TIGR:cd03031	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:+:375256231..375258015

Molecular Weight (calculated)

45615.0 Da

IEP (calculated)

10.289

GRAVY (calculated)

-0.503

Length

424 amino acids

Sequence
(BLAST)

001: MGCISSKLLP PGPGGRSGAA RATVRGRVDH VVSLTSTTYG VLDLQAKHGA TATAGAKDLP LPQEQEKPIS REWKRASAKR PPPLVVPDAK KPAPAAKPET
101: GMEVINAWEI MAGLEDADSP AKKPAKPGRW SPARVLAMAL SSPKRSSAKR RNTPGKENSP LQRCSGKENS KPSDVADEDR VLRPYNSIDN SKLSRASKRF
201: SPGSARVARK PSAAETGGMS SSRRSLSPLF DPELLASIER ELSEEGAHIK RVIGSEKPKQ PKVIPAIVAE GKCPPGGADA VVLYTTTLRG IRKTFEECNA
301: VRAAIEAHDV KVIERDVSMD SGYREELRLL LGGRELRVPA VFVRGKHVGG AAEVTRMEEE GKLKALLQGL PRARVWCAGC AGVRFVMCRD CNGSRKVRVD
401: GERKEMVQCG ECNENGLVRC PICS

Best Arabidopsis Sequence Match ( AT5G03870.1 )
(BLAST)

001: MGCVSSKLGK KKLIREIRVN NGGDHIVSLT STTYGHLDLD ERAETSPKSL EVTKGEVFES EIIPRRSIKR DDPEIINTWE LMEDLEDSMH VSNPQKISPK
101: SRGIFGKSWK TPVKSVVESP KRGSSKRFGG KENNSRGVSP NQILKPKNIL ETPKRGVMRL SFPLKSEESS VTVTQRRKSY SPMFDPDLVA SYERELSQEK
201: EQIKMVISPV VHESRKTEKT ERILEKFPEK CPPGGEHSVV IYITTLRGIR KTFEDCNVVR SILDSHEVRF SERDVSMHSV FKEEIRGIMG TKHVKIPAVF
301: VKGRMVGSVE EVMRLEEEGK LGILLEGIPA ARLGGSCCRG CGGMRFMMCV VCNGSCKVRE EEKKSMVKCL KCNENGLVLC PICS

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9LZC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.