Factsheet for TraesCS3D01G166500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G189800.1	Wheat	cytosol	98.51	97.78
TraesCS3A01G158800.1	Wheat	cytosol	94.54	94.07
HORVU3Hr1G057240.1	Barley	cytosol	94.54	93.38
Os01t0235900-00	Rice	plasma membrane	66.0	68.03
Zm00001d039270_P001	Maize	cytosol	65.26	66.25
KXG31460	Sorghum	cytosol	64.27	64.75
GSMUA_Achr10P...	Banana	cytosol	48.64	52.69
VIT_02s0025g01710.t01	Wine grape	cytosol	37.47	39.95
CDY47842	Canola	cytosol	34.24	38.33
Bra040917.1-P	Field mustard	cytosol	33.99	38.06
CDY62024	Canola	cytosol	33.99	38.06
KRH60067	Soybean	cytosol	31.76	37.98
Solyc08g082590.2.1	Tomato	cytosol	36.97	37.91
PGSC0003DMT400031969	Potato	cytosol	36.23	37.34
AT1G64500.1	Thale cress	cytosol	33.0	36.14
TraesCS2D01G131300.1	Wheat	cytosol	17.87	34.62
TraesCS1D01G095500.1	Wheat	cytosol	23.57	30.94
TraesCS2D01G250600.1	Wheat	mitochondrion	19.85	29.63
TraesCS5D01G381700.1	Wheat	mitochondrion	23.08	28.88
TraesCS1D01G224200.1	Wheat	mitochondrion	16.13	28.14
TraesCS3D01G343100.1	Wheat	plastid	17.12	27.49
TraesCS1D01G294800.1	Wheat	plastid	15.38	24.7
TraesCS2D01G292800.1	Wheat	mitochondrion	25.06	23.82
TraesCS4D01G286300.1	Wheat	mitochondrion	19.11	23.62
TraesCS6D01G285000.1	Wheat	mitochondrion	20.6	21.96
TraesCS3D01G334100.1	Wheat	plastid	20.1	19.76
TraesCS2D01G523500.1	Wheat	plastid	20.6	18.12
TraesCS7D01G186600.1	Wheat	plastid	21.09	16.9

Protein Annotations

MapMan:20.5.4	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005884	GO:GO:0008150	GO:GO:0009055
GO:GO:0009902	GO:GO:0009987	GO:GO:0015035	GO:GO:0016043	GO:GO:0019725	GO:GO:0045454
GO:GO:0051017	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168
PANTHER:PTHR10168:SF196	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3D01G166500	EnsemblPlants:TraesCS3D01G166500.1	SEG:seg

Description

No Description!

Coordinates

chr3D:+:138895639..138896850

Molecular Weight (calculated)

43096.6 Da

IEP (calculated)

4.806

GRAVY (calculated)

-0.661

Length

403 amino acids

Sequence
(BLAST)

001: MGCSGSKEVA VAEVAYRPPA TSVSLFDISA VEEPWLIAKQ NAATNGDVEA EQSDDEYEDD DEEEEEEEQD AKKPTAGVAL PILDKLDGYE LAPASWSEVS
101: KALEDIKPTL DSKQTTDPKP APKKKKKKKK QPAEAQAQPA APPPTQKEQT SQTPSVAGTG EAAKKAPPPP TPYARGASDS DTRKPAPPEL TGRRVVKENP
201: FLLRDRETKN ADGTATAPKW RRRDPFEGYP ERRPPGASGG GVVLYTTTLR GVRRTFEECE RARAAVEMCA EAAGLTVDER DVALHGEYLR ELRELLAADE
301: EQGAGVSPPP RLFVMGRYLG GAEACAELVE SGKLAEMLRW ARARGEACAA KDGRGCEGCG GARFVPCLEC GGGCKVVVGG TGGVVERCGK CNENGLMMCP
401: ICH

Best Arabidopsis Sequence Match ( AT1G64500.1 )
(BLAST)

001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN

Arabidopsis Description

F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.