Factsheet for TraesCS5D01G381700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G374300.1	Wheat	mitochondrion	89.44	91.43
TraesCS5A01G372200.1	Wheat	mitochondrion	90.99	89.06
Os03t0648800-00	Rice	mitochondrion	68.32	67.9
HORVU5Hr1G092580.1	Barley	cytosol	50.0	66.53
EER91159	Sorghum	mitochondrion	68.94	62.36
Zm00001d013668_P001	Maize	mitochondrion	67.7	62.29
Zm00001d033205_P001	Maize	mitochondrion	65.22	60.69
VIT_08s0032g01030.t01	Wine grape	cytosol	24.53	43.17
TraesCS2D01G131300.1	Wheat	cytosol	24.84	38.46
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	34.78	37.46
TraesCS2D01G250600.1	Wheat	mitochondrion	30.75	36.67
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	26.71	35.25
CDX98926	Canola	cytosol	26.09	35.0
CDY67834	Canola	cytosol	26.09	34.71
Bra009197.1-P	Field mustard	cytosol	26.09	34.71
Bra005898.1-P	Field mustard	cytosol, mitochondrion	26.4	34.41
TraesCS1D01G224200.1	Wheat	mitochondrion	24.22	33.77
AT5G06470.1	Thale cress	cytosol, mitochondrion	24.53	33.05
TraesCS3D01G343100.1	Wheat	plastid	25.47	32.67
KRH72143	Soybean	mitochondrion	26.71	32.58
KRH32876	Soybean	cytosol	26.71	31.16
KRG96283	Soybean	mitochondrion	24.53	31.1
VIT_13s0073g00520.t01	Wine grape	cytosol	36.02	30.85
Solyc11g006430.1.1	Tomato	cytosol	34.16	30.47
KRH68025	Soybean	cytosol	24.84	30.3
TraesCS1D01G095500.1	Wheat	cytosol	28.88	30.29
PGSC0003DMT400005022	Potato	cytosol	34.16	29.97
KRG92161	Soybean	cytosol	35.09	29.74
CDY55763	Canola	cytosol, mitochondrion	20.5	29.73
CDX81007	Canola	cytosol, mitochondrion	20.5	29.73
KRH34627	Soybean	cytosol	33.85	29.54
CDY04838	Canola	mitochondrion	31.99	28.77
Bra028902.1-P	Field mustard	mitochondrion	31.99	28.77
AT3G11773.2	Thale cress	cytosol	17.08	27.5
TraesCS1D01G294800.1	Wheat	plastid	21.12	27.09
TraesCS4D01G286300.1	Wheat	mitochondrion	26.71	26.38
AT5G01420.1	Thale cress	cytosol	30.43	24.44
TraesCS2D01G292800.1	Wheat	mitochondrion	30.43	23.11
TraesCS3D01G166500.1	Wheat	cytosol	28.88	23.08
TraesCS6D01G285000.1	Wheat	mitochondrion	27.02	23.02
TraesCS3D01G334100.1	Wheat	plastid	27.33	21.46
TraesCS2D01G523500.1	Wheat	plastid	29.19	20.52
TraesCS7D01G186600.1	Wheat	plastid	28.57	18.29

Protein Annotations

EnsemblPlants:TraesCS5D01G381700.1	EnsemblPlantsGene:TraesCS5D01G381700	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:Glutaredoxin
InterPro:IPR002109	InterPro:Thioredoxin-like_sf	PANTHER:PTHR10168	PANTHER:PTHR10168:SF195	PFAM:PF00462	PFscan:PS51354
SEG:seg	SUPFAM:SSF52833	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:+:451889684..451890652

Molecular Weight (calculated)

33962.0 Da

IEP (calculated)

5.283

GRAVY (calculated)

-0.400

Length

322 amino acids

Sequence
(BLAST)

001: MRGLRSRILR TLQSFPNAAA AQSNALLPPP DAAAPAPSED VPEPADGDCR GGGGGDDDKE NFSPKAKKMK VGSGREGDCP GEPGRGYRRP ELESPSLFDP
101: DLLAAFRGVV DAYAQALEKT QRHGDDFDDA DDDIAAALDA GGRDEDPLAG LESRCPPGGA RAVVLYTTSL RGVRKTFEDC ATVRRLLDGL RVAFLERDVS
201: MHAPYRDELR ALLPPPPGGA GDGASMPLPP RLFVDGRYVG GADEVVALHE RSRLRPMLRR AARRRAGDAA CAVCGGAWFV VCGGCSGRHW LYDDGSAAAV
301: AASRVPCPGC NENGLVPCPL CS

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.