Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G372200.1 | Wheat | plastid | 94.15 | 93.92 |
| TraesCS3A01G340600.1 | Wheat | plastid | 93.41 | 93.41 |
| CDY00113 | Canola | cytosol | 14.15 | 43.61 |
| Zm00001d024469_P001 | Maize | cytosol, plastid | 38.29 | 42.78 |
| EES14625 | Sorghum | cytosol, plastid | 41.71 | 42.22 |
| Os08t0171333-00 | Rice | plastid | 30.98 | 40.19 |
| TraesCS2D01G131300.1 | Wheat | cytosol | 19.76 | 38.94 |
| TraesCS6D01G285000.1 | Wheat | mitochondrion | 34.15 | 37.04 |
| TraesCS2D01G523500.1 | Wheat | plastid | 40.24 | 36.03 |
| TraesCS1D01G224200.1 | Wheat | mitochondrion | 18.78 | 33.33 |
| TraesCS4D01G286300.1 | Wheat | mitochondrion | 26.34 | 33.13 |
| CDY04039 | Canola | cytosol | 25.61 | 31.16 |
| TraesCS3D01G343100.1 | Wheat | plastid | 19.02 | 31.08 |
| Bra033062.1-P | Field mustard | cytosol | 24.88 | 30.27 |
| CDY70277 | Canola | cytosol | 24.88 | 30.27 |
| TraesCS2D01G250600.1 | Wheat | mitochondrion | 19.76 | 30.0 |
| CDY67051 | Canola | cytosol | 27.56 | 29.82 |
| CDY30281 | Canola | cytosol | 27.8 | 29.53 |
| PGSC0003DMT400017853 | Potato | cytosol | 22.93 | 29.1 |
| TraesCS1D01G294800.1 | Wheat | plastid | 17.8 | 29.08 |
| TraesCS1D01G095500.1 | Wheat | cytosol | 21.71 | 28.99 |
| Bra025357.1-P | Field mustard | cytosol | 29.02 | 28.95 |
| CDX86410 | Canola | cytosol | 29.02 | 28.95 |
| CDX85224 | Canola | cytosol | 28.78 | 28.5 |
| CDY20015 | Canola | cytosol | 28.05 | 28.47 |
| Solyc02g067400.1.1 | Tomato | cytosol | 19.51 | 28.17 |
| Bra025638.1-P | Field mustard | cytosol | 28.05 | 28.05 |
| AT3G28850.1 | Thale cress | cytosol | 29.27 | 28.04 |
| Bra039044.1-P | Field mustard | cytosol | 28.54 | 27.73 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 26.34 | 27.69 |
| TraesCS7D01G186600.1 | Wheat | plastid | 33.9 | 27.63 |
| PGSC0003DMT400056766 | Potato | cytosol | 26.59 | 27.46 |
| TraesCS5D01G381700.1 | Wheat | mitochondrion | 21.46 | 27.33 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 27.32 | 26.73 |
| PGSC0003DMT400003335 | Potato | cytosol | 27.07 | 26.49 |
| KRH01158 | Soybean | cytosol | 29.76 | 26.29 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 28.54 | 26.0 |
| KRH40113 | Soybean | cytosol, mitochondrion | 29.02 | 25.98 |
| KRG93517 | Soybean | cytosol | 25.61 | 24.03 |
| TraesCS3D01G166500.1 | Wheat | cytosol | 19.76 | 20.1 |
| TraesCS2D01G292800.1 | Wheat | mitochondrion | 20.73 | 20.05 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF80 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS3D01G334100 | EnsemblPlants:TraesCS3D01G334100.1 | TIGR:cd03031 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:+:446064211..446065443
Molecular Weight (calculated)
43245.0 Da
IEP (calculated)
5.905
GRAVY (calculated)
-0.189
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCNSSTLAR GGVDMSALPA PARPERRHSL PSRAASALGS RGLCRGRHDG LHPYTTLPLE ETVRGEAQYG APSAEAKAAS LSGDAATWPA EGRAPMKLSP
101: AGILEGAASA TSSTAHWTAS ATSSTPQFSA SPSWFRGESS SPPPPVQFVA PDFDPAILSL FREALVGQSP SHPAVLFPEN EATTQRETTA LDEVVPPAAR
201: HMPEVTGFVR ARVDEFHKKL EEKKEMKEAE AQSATRDAMD EVAAPPPRKA VVVYFTSIRG VRKTFSDGAA VRAILFSYRV RVDERDVSMH AAFKDELRNL
301: VGLAAGAGQV LPRVFVLGDG EQHLDLGGAD EVSALHESGE LAHALAGCET VAAHLPPCVG CGDLRFLPCG TCSGSCKLFA GDEGGCVANM FEECTHCNEN
401: GLIRCPVCCL
101: AGILEGAASA TSSTAHWTAS ATSSTPQFSA SPSWFRGESS SPPPPVQFVA PDFDPAILSL FREALVGQSP SHPAVLFPEN EATTQRETTA LDEVVPPAAR
201: HMPEVTGFVR ARVDEFHKKL EEKKEMKEAE AQSATRDAMD EVAAPPPRKA VVVYFTSIRG VRKTFSDGAA VRAILFSYRV RVDERDVSMH AAFKDELRNL
301: VGLAAGAGQV LPRVFVLGDG EQHLDLGGAD EVSALHESGE LAHALAGCET VAAHLPPCVG CGDLRFLPCG TCSGSCKLFA GDEGGCVANM FEECTHCNEN
401: GLIRCPVCCL
001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
Arabidopsis Description
Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.