CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70277	Canola	cytosol	95.85	95.85
CDY00113	Canola	cytosol	31.45	79.7
AT3G28850.1	Thale cress	cytosol	78.64	61.92
CDX85224	Canola	cytosol	75.96	61.84
CDX86410	Canola	cytosol	75.37	61.8
CDY20015	Canola	cytosol	73.59	61.39
CDY67051	Canola	cytosol	64.09	56.99
CDY30281	Canola	cytosol	64.69	56.48
Zm00001d026424_P001	Maize	cytosol	18.69	50.4
PGSC0003DMT400017853	Potato	cytosol	47.48	49.54
PGSC0003DMT400003335	Potato	cytosol	57.57	46.3
Solyc02g087850.1.1	Tomato	cytosol, plastid	56.97	45.82
PGSC0003DMT400056766	Potato	cytosol	52.23	44.33
Solyc02g067400.1.1	Tomato	cytosol	36.8	43.66
CDX80893	Canola	cytosol	13.65	42.2
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	55.49	41.56
CDY11274	Canola	cytosol	13.35	41.28
KRH40113	Soybean	cytosol, mitochondrion	55.79	41.05
KRH01158	Soybean	cytosol	56.38	40.95
CDX74801	Canola	cytosol	20.18	40.72
KRG93517	Soybean	cytosol	51.93	40.05
CDY14169	Canola	cytosol	27.6	37.96
Zm00001d027853_P001	Maize	plastid	35.61	36.81
GSMUA_Achr3P01620_001	Banana	mitochondrion	37.98	36.26
TraesCS4D01G286300.1	Wheat	mitochondrion	35.01	36.2
HORVU4Hr1G075190.2	Barley	mitochondrion	35.01	36.09
TraesCS4A01G016500.1	Wheat	mitochondrion	35.31	36.06
EER95421	Sorghum	mitochondrion, plastid	35.61	35.71
GSMUA_Achr8P24180_001	Banana	cytosol	36.5	35.24
Os03t0170800-00	Rice	mitochondrion	33.53	35.09
TraesCS4B01G287700.1	Wheat	mitochondrion	34.12	35.06
GSMUA_Achr4P00540_001	Banana	mitochondrion	40.65	34.86
CDX93821	Canola	cytosol	26.71	34.62
CDY01245	Canola	cytosol	26.41	34.36
CDY05109	Canola	cytosol	25.52	32.45
CDX90765	Canola	cytosol	25.52	32.21
EES05526	Sorghum	mitochondrion	36.2	32.11
Os02t0748800-00	Rice	cytosol, mitochondrion	35.01	31.98
Zm00001d052252_P001	Maize	mitochondrion	34.72	31.79
CDY32696	Canola	cytosol, plastid	23.15	31.08
TraesCS6D01G285000.1	Wheat	mitochondrion	34.72	30.95
HORVU0Hr1G017160.1	Barley	mitochondrion	34.72	30.79
Zm00001d018058_P001	Maize	plastid	34.42	30.77
TraesCS6B01G334000.1	Wheat	mitochondrion	34.72	30.63
CDY59509	Canola	cytosol, plastid	22.85	30.56
CDX78539	Canola	cytosol, plastid	23.74	30.53
CDY32794	Canola	peroxisome	23.44	30.5
TraesCS6A01G305800.1	Wheat	mitochondrion	34.72	30.39
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	36.2	30.2
CDY70634	Canola	plastid	23.74	29.96
CDX70521	Canola	plastid	23.74	29.85
CDY67732	Canola	plastid	22.85	29.73
Zm00001d002123_P001	Maize	plastid	37.39	29.72
CDX76039	Canola	plastid	30.86	29.63
CDX74802	Canola	cytosol, mitochondrion	21.66	29.55
CDX98926	Canola	cytosol	20.77	29.17
CDY67834	Canola	cytosol	20.77	28.93
CDY18861	Canola	mitochondrion	21.07	28.86
Os06t0226100-00	Rice	plastid	32.34	28.46
CDY06932	Canola	plastid	30.86	28.26
CDY30970	Canola	plastid	30.56	27.99
CDY14762	Canola	cytosol, plastid	29.97	27.9
Os04t0641300-01	Rice	cytosol, plastid	35.61	27.09
CDX81007	Canola	cytosol, mitochondrion	17.8	27.03
Zm00001d037218_P001	Maize	plastid	34.12	26.87
CDY04902	Canola	nucleus	27.6	26.8
CDY55763	Canola	cytosol, mitochondrion	17.51	26.58
Zm00001d044841_P001	Maize	plastid	34.42	26.54
HORVU7Hr1G038000.2	Barley	cytosol, plastid	33.23	26.48
CDY06138	Canola	plastid	30.86	26.33
TraesCS2D01G523500.1	Wheat	plastid	35.61	26.2
CDX72074	Canola	plastid	30.86	26.13
TraesCS2B01G551200.1	Wheat	cytosol, plastid	35.31	25.98
TraesCS2A01G521700.1	Wheat	plastid	35.31	25.98
CDY35418	Canola	plastid	30.86	25.94
CDY22520	Canola	plastid	30.56	25.69
TraesCS3D01G334100.1	Wheat	plastid	31.16	25.61
HORVU2Hr1G115200.2	Barley	cytosol	34.72	25.38
Zm00001d024469_P001	Maize	cytosol, plastid	27.6	25.34
TraesCS3B01G372200.1	Wheat	plastid	30.86	25.3
CDY47842	Canola	cytosol	27.0	25.28
EER88108	Sorghum	plastid	34.12	25.22
TraesCS3A01G340600.1	Wheat	plastid	30.27	24.88
OQU82428	Sorghum	cytosol, plastid	36.5	24.75
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	33.23	24.62
CDY62024	Canola	cytosol	26.11	24.44
TraesCS7B01G090200.1	Wheat	cytosol, plastid	33.53	24.2
EES14625	Sorghum	cytosol, plastid	27.89	23.21
TraesCS7D01G186600.1	Wheat	plastid	33.23	22.27
Os08t0171333-00	Rice	plastid	18.99	20.25
CDY04838	Canola	mitochondrion	20.18	18.99
CDY11275	Canola	nucleus	8.31	14.14
CDX80894	Canola	nucleus	7.72	13.27

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078ETZ2	EnsemblPlants:CDY04039	ProteinID:CDY04039	ProteinID:CDY04039.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00117628001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE6E25	SEG:seg	:	:	:

Description

BnaC02g37540D

Coordinates

chrLK031948:+:680118..681131

Molecular Weight (calculated)

37581.4 Da

IEP (calculated)

5.210

GRAVY (calculated)

-0.643

Length

337 amino acids

Sequence
(BLAST)

001: MGCASSKHRK RCLHCRQGYS PVEISPRPSV QHPPQHSDDM VALSSSTLGS LKLCYSSFGH SRIHLADFTG NLATDQSGEN RQEDGFGQKE DRDKEMQAKL
101: MEAKVWSSMM NDKIPKIVPK TPILTPPGEP ETINTWEMMV GLEDSISPLR SPSHVRSFSF DGGCKCPKGN GNVIVYFTSL RGIRKTYEES CDVRVILKSI
201: GVRVDERDVS MHSSFKDELK ELLLEGKFNN DVGITLPRVF LGGKYLGGAE EIRKLNEDGK LEKILEGCER VEENKNGNGQ ECEACGDIRF VPCETCSGSC
301: KVYNEDDESE KEDRDYGFQT CPDCNENGLV RCPLCCD

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.