Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G286300.1 | Wheat | mitochondrion | 94.82 | 95.4 |
| TraesCS4A01G016500.1 | Wheat | mitochondrion | 93.9 | 93.33 |
| HORVU4Hr1G075190.2 | Barley | mitochondrion | 92.99 | 93.27 |
| Os03t0170800-00 | Rice | mitochondrion | 75.61 | 77.02 |
| EER95421 | Sorghum | mitochondrion, plastid | 77.13 | 75.3 |
| Zm00001d027853_P001 | Maize | plastid | 74.09 | 74.54 |
| GSMUA_Achr3P01620_001 | Banana | mitochondrion | 50.3 | 46.74 |
| CDY00113 | Canola | cytosol | 17.38 | 42.86 |
| TraesCS2B01G150900.1 | Wheat | cytosol | 24.09 | 38.35 |
| TraesCS6B01G334000.1 | Wheat | mitochondrion | 40.85 | 35.08 |
| CDY70277 | Canola | cytosol | 35.67 | 34.72 |
| Bra033062.1-P | Field mustard | cytosol | 35.67 | 34.72 |
| PGSC0003DMT400017853 | Potato | cytosol | 34.15 | 34.67 |
| CDY04039 | Canola | cytosol | 35.06 | 34.12 |
| TraesCS1B01G114500.1 | Wheat | cytosol | 32.01 | 33.98 |
| CDY67051 | Canola | cytosol | 37.5 | 32.45 |
| CDY30281 | Canola | cytosol | 38.11 | 32.38 |
| PGSC0003DMT400056766 | Potato | cytosol | 39.02 | 32.24 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 37.8 | 31.79 |
| TraesCS3B01G381400.1 | Wheat | mitochondrion, plastid | 24.09 | 31.73 |
| TraesCS1B01G235900.1 | Wheat | mitochondrion | 22.26 | 31.6 |
| Bra025638.1-P | Field mustard | cytosol | 39.33 | 31.46 |
| PGSC0003DMT400003335 | Potato | cytosol | 39.63 | 31.03 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 39.63 | 31.03 |
| CDX86410 | Canola | cytosol | 38.11 | 30.41 |
| Bra025357.1-P | Field mustard | cytosol | 38.11 | 30.41 |
| Solyc02g067400.1.1 | Tomato | cytosol | 26.22 | 30.28 |
| TraesCS2B01G263800.1 | Wheat | mitochondrion | 24.7 | 30.0 |
| CDX85224 | Canola | cytosol | 37.8 | 29.95 |
| KRH40113 | Soybean | cytosol, mitochondrion | 41.77 | 29.91 |
| Bra039044.1-P | Field mustard | cytosol | 38.41 | 29.86 |
| KRH01158 | Soybean | cytosol | 42.07 | 29.74 |
| CDY20015 | Canola | cytosol | 36.59 | 29.7 |
| AT3G28850.1 | Thale cress | cytosol | 38.72 | 29.67 |
| KRG93517 | Soybean | cytosol | 39.02 | 29.29 |
| TraesCS2B01G551200.1 | Wheat | cytosol, plastid | 39.63 | 28.38 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 38.11 | 27.78 |
| TraesCS3B01G372200.1 | Wheat | plastid | 34.15 | 27.25 |
| TraesCS7B01G090200.1 | Wheat | cytosol, plastid | 38.41 | 26.98 |
| TraesCS5B01G374300.1 | Wheat | mitochondrion | 25.3 | 26.35 |
| TraesCS1B01G305600.1 | Wheat | mitochondrion, plastid | 20.12 | 26.29 |
| TraesCS2B01G311500.1 | Wheat | mitochondrion | 28.96 | 22.51 |
| TraesCS3B01G189800.1 | Wheat | cytosol | 23.78 | 19.21 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G287700.1 | EnsemblPlantsGene:TraesCS4B01G287700 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF130 | PFAM:PF00462 | PFscan:PS51354 |
| SEG:seg | SUPFAM:SSF52833 | TIGR:cd03031 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4B:+:571058879..571059865
Molecular Weight (calculated)
35361.0 Da
IEP (calculated)
5.291
GRAVY (calculated)
-0.288
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTTSRQAR HDLRYCPSPL PLPRCQSFPA RFDAGVHLVR LTSSTLGSLE VDKAAGPRAP EVADAGARAP RRMVPRTPTM TPPNEPEDID AWALMAGLEE
101: HSPLLAAPFG RHSFSFPIAD TAQQEFAASS KVTPLPMRML SVNDEEMASK VKEPPPSRKA VLYFTSLRGV RATHEDCSLA RAILKGYGVR IDERDVSMHR
201: GFRDELNGLF GLRAGALAKC WAPAAPILPS LFVDGELVGN AEELKRLHET GELAARLAWC ESGGPGACEA CGDARFVLCE ACSGSCKVYV NEEDDEDGEG
301: TDEGGSGFRR CTECNENGIV RCSVCCCS
101: HSPLLAAPFG RHSFSFPIAD TAQQEFAASS KVTPLPMRML SVNDEEMASK VKEPPPSRKA VLYFTSLRGV RATHEDCSLA RAILKGYGVR IDERDVSMHR
201: GFRDELNGLF GLRAGALAKC WAPAAPILPS LFVDGELVGN AEELKRLHET GELAARLAWC ESGGPGACEA CGDARFVLCE ACSGSCKVYV NEEDDEDGEG
301: TDEGGSGFRR CTECNENGIV RCSVCCCS
001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
Arabidopsis Description
Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.