Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00113 | Canola | cytosol | 26.87 | 86.47 |
| Bra039044.1-P | Field mustard | cytosol | 80.37 | 81.52 |
| CDY20015 | Canola | cytosol | 76.87 | 81.44 |
| Bra033062.1-P | Field mustard | cytosol | 61.92 | 78.64 |
| CDY04039 | Canola | cytosol | 61.92 | 78.64 |
| CDY70277 | Canola | cytosol | 61.68 | 78.34 |
| CDX86410 | Canola | cytosol | 73.83 | 76.89 |
| Bra025357.1-P | Field mustard | cytosol | 73.83 | 76.89 |
| CDX85224 | Canola | cytosol | 74.3 | 76.81 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 57.24 | 62.82 |
| PGSC0003DMT400003335 | Potato | cytosol | 53.74 | 54.89 |
| PGSC0003DMT400017853 | Potato | cytosol | 41.36 | 54.8 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 53.04 | 54.18 |
| PGSC0003DMT400056766 | Potato | cytosol | 47.2 | 50.88 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 53.27 | 50.67 |
| Zm00001d026424_P001 | Maize | cytosol | 14.72 | 50.4 |
| KRH40113 | Soybean | cytosol, mitochondrion | 52.1 | 48.69 |
| KRH01158 | Soybean | cytosol | 52.34 | 48.28 |
| KRG93517 | Soybean | cytosol | 48.83 | 47.83 |
| Solyc02g067400.1.1 | Tomato | cytosol | 31.07 | 46.83 |
| GSMUA_Achr3P01620_001 | Banana | mitochondrion | 34.11 | 41.36 |
| GSMUA_Achr4P00540_001 | Banana | mitochondrion | 37.85 | 41.22 |
| Zm00001d027853_P001 | Maize | plastid | 30.84 | 40.49 |
| TraesCS4D01G286300.1 | Wheat | mitochondrion | 30.14 | 39.57 |
| Os03t0170800-00 | Rice | mitochondrion | 29.67 | 39.44 |
| EER95421 | Sorghum | mitochondrion, plastid | 30.84 | 39.29 |
| GSMUA_Achr8P24180_001 | Banana | cytosol | 32.01 | 39.26 |
| TraesCS4A01G016500.1 | Wheat | mitochondrion | 30.14 | 39.09 |
| HORVU4Hr1G075190.2 | Barley | mitochondrion | 29.67 | 38.84 |
| TraesCS4B01G287700.1 | Wheat | mitochondrion | 29.67 | 38.72 |
| Os02t0748800-00 | Rice | cytosol, mitochondrion | 32.01 | 37.13 |
| EES05526 | Sorghum | mitochondrion | 32.48 | 36.58 |
| HORVU0Hr1G017160.1 | Barley | mitochondrion | 31.54 | 35.53 |
| TraesCS6D01G285000.1 | Wheat | mitochondrion | 31.31 | 35.45 |
| TraesCS6B01G334000.1 | Wheat | mitochondrion | 31.54 | 35.34 |
| Zm00001d052252_P001 | Maize | mitochondrion | 30.37 | 35.33 |
| TraesCS6A01G305800.1 | Wheat | mitochondrion | 31.78 | 35.32 |
| Zm00001d018058_P001 | Maize | plastid | 31.07 | 35.28 |
| GSMUA_Achr7P20960_001 | Banana | mitochondrion, nucleus | 32.24 | 34.16 |
| AT5G13810.1 | Thale cress | plastid | 21.5 | 33.58 |
| AT1G32760.1 | Thale cress | plastid | 23.83 | 32.48 |
| Os06t0226100-00 | Rice | plastid | 28.74 | 32.11 |
| Zm00001d002123_P001 | Maize | plastid | 31.78 | 32.08 |
| Os04t0641300-01 | Rice | cytosol, plastid | 32.01 | 30.93 |
| AT3G57070.1 | Thale cress | plastid | 29.44 | 30.22 |
| TraesCS2D01G523500.1 | Wheat | plastid | 32.01 | 29.91 |
| Zm00001d037218_P001 | Maize | plastid | 29.91 | 29.91 |
| HORVU7Hr1G038000.2 | Barley | cytosol, plastid | 29.44 | 29.79 |
| AT5G06470.1 | Thale cress | cytosol, mitochondrion | 16.59 | 29.71 |
| TraesCS2A01G521700.1 | Wheat | plastid | 31.78 | 29.69 |
| TraesCS2B01G551200.1 | Wheat | cytosol, plastid | 31.78 | 29.69 |
| AT5G58530.1 | Thale cress | cytosol, plastid | 18.69 | 29.3 |
| TraesCS3A01G340600.1 | Wheat | plastid | 28.04 | 29.27 |
| TraesCS3D01G334100.1 | Wheat | plastid | 28.04 | 29.27 |
| TraesCS3B01G372200.1 | Wheat | plastid | 28.04 | 29.2 |
| HORVU2Hr1G115200.2 | Barley | cytosol | 31.31 | 29.07 |
| Zm00001d044841_P001 | Maize | plastid | 29.67 | 29.06 |
| EER88108 | Sorghum | plastid | 30.37 | 28.51 |
| AT5G03870.1 | Thale cress | cytosol | 25.47 | 28.39 |
| TraesCS7A01G185200.1 | Wheat | mitochondrion, plastid | 29.91 | 28.13 |
| AT2G41330.1 | Thale cress | plastid | 26.4 | 28.11 |
| Zm00001d024469_P001 | Maize | cytosol, plastid | 24.07 | 28.07 |
| AT4G10630.1 | Thale cress | cytosol | 21.73 | 27.84 |
| TraesCS7B01G090200.1 | Wheat | cytosol, plastid | 30.14 | 27.62 |
| OQU82428 | Sorghum | cytosol, plastid | 31.78 | 27.36 |
| EES14625 | Sorghum | cytosol, plastid | 25.47 | 26.91 |
| AT3G11773.2 | Thale cress | cytosol | 12.15 | 26.0 |
| AT1G64500.1 | Thale cress | cytosol | 22.2 | 25.82 |
| TraesCS7D01G186600.1 | Wheat | plastid | 30.14 | 25.65 |
| Os08t0171333-00 | Rice | plastid | 16.82 | 22.78 |
| AT5G01420.1 | Thale cress | cytosol | 19.39 | 20.7 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | EntrezGene:822517 | ProteinID:AEE77496.1 | ArrayExpress:AT3G28850 | EnsemblPlantsGene:AT3G28850 |
| RefSeq:AT3G28850 | TAIR:AT3G28850 | RefSeq:AT3G28850-TAIR-G | EnsemblPlants:AT3G28850.1 | TAIR:AT3G28850.1 | ProteinID:BAB03183.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0016020 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | RefSeq:NP_189527.1 | PFAM:PF00462 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF110 | UniProt:Q9LH89 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI00000AB9C4 | SEG:seg | : | : | : |
Description
Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
Coordinates
chr3:+:10848241..10850286
Molecular Weight (calculated)
48181.3 Da
IEP (calculated)
4.719
GRAVY (calculated)
-0.748
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.