CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026424_P001	Maize	cytosol	21.93	87.2
Zm00001d002123_P001	Maize	plastid	74.25	87.03
Os04t0641300-01	Rice	cytosol, plastid	61.17	68.62
HORVU2Hr1G115200.2	Barley	cytosol	58.75	63.34
TraesCS2D01G523500.1	Wheat	plastid	57.75	62.66
TraesCS2A01G521700.1	Wheat	plastid	57.75	62.66
TraesCS2B01G551200.1	Wheat	cytosol, plastid	57.14	62.01
CDY00113	Canola	cytosol	13.28	49.62
EER95421	Sorghum	mitochondrion, plastid	30.18	44.64
EES05526	Sorghum	mitochondrion	33.0	43.16
EER94843	Sorghum	cytosol	17.5	42.86
EES14625	Sorghum	cytosol, plastid	34.61	42.47
KXG36862	Sorghum	cytosol	16.3	38.03
PGSC0003DMT400017853	Potato	cytosol	24.35	37.46
EER88108	Sorghum	plastid	34.21	37.28
Bra033062.1-P	Field mustard	cytosol	24.75	36.5
CDY04039	Canola	cytosol	24.75	36.5
CDY70277	Canola	cytosol	24.55	36.2
CDY67051	Canola	cytosol	27.57	36.15
CDY30281	Canola	cytosol	27.57	35.49
EES18035	Sorghum	mitochondrion	17.1	35.42
PGSC0003DMT400056766	Potato	cytosol	28.17	35.26
Solyc02g087850.1.1	Tomato	cytosol, plastid	29.18	34.61
PGSC0003DMT400003335	Potato	cytosol	29.18	34.61
EES19677	Sorghum	plastid	18.31	34.47
Bra025638.1-P	Field mustard	cytosol	28.17	34.15
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	30.38	33.56
Solyc02g067400.1.1	Tomato	cytosol	19.11	33.45
Bra025357.1-P	Field mustard	cytosol	27.57	33.33
CDX86410	Canola	cytosol	27.57	33.33
CDX85224	Canola	cytosol	27.57	33.09
EER95886	Sorghum	mitochondrion	18.11	32.85
AT5G39865.1	Thale cress	cytosol, mitochondrion	25.75	32.82
KRH40113	Soybean	cytosol, mitochondrion	30.18	32.75
Bra039044.1-P	Field mustard	cytosol	27.57	32.46
KXG33640	Sorghum	mitochondrion	17.3	32.45
CDY20015	Canola	cytosol	26.36	32.43
KRH01158	Soybean	cytosol	29.78	31.9
AT3G28850.1	Thale cress	cytosol	27.36	31.78
KRG93517	Soybean	cytosol	27.16	30.89
KXG29248	Sorghum	cytosol	20.12	30.4
OQU81447	Sorghum	plastid	10.87	28.57
EER91159	Sorghum	mitochondrion	20.12	28.09
EES10743	Sorghum	cytosol	21.53	23.73
KXG31460	Sorghum	cytosol	16.1	20.0

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A1Z5RFA9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	EnsemblPlants:OQU82428	ProteinID:OQU82428	ProteinID:OQU82428.1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF80	EnsemblPlantsGene:SORBI_3006G236400	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000B8B9F88
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:57792369..57794249

Molecular Weight (calculated)

54241.0 Da

IEP (calculated)

4.562

GRAVY (calculated)

-0.506

Length

497 amino acids

Sequence
(BLAST)

001: MGCATSTEAR RDMVWVGADA PSRRSFSLPS VDRQRLRLRA GSMLGTLGLA GSARHSGSHA TLSVEEMMKG DNDHGADAVL LGDDAAKRPL KPRTPTLTPP
101: NEPEVINAWE LMAGLEDDEP TPRAPYKNLL LDEPPHEFVL EAPPLPQWMQ ADMDIPVALD FDPEVLSGFR EALEGTTPSP EPAVVSSAED ETPREQEPQN
201: RKGADACDMP MSPPSPEPAV VSSAEDETPT REQERKDRKD ADACDMPMSP PSPEPAAVVV SSAEDKTPRE QERKDRKDAD ACVMPMSPAT GDMPPELSGL
301: VRARIIAFQE RIERRRTKGR DAKLSPLWPP GGERKAVVYF TSLRGVRKTF VDCCAVRSIL RSYGVRLDER DVSMHAVFKA ELADLLGPGF AGAALPRVFI
401: DGQYLGGAED VHFLHEAGEL GRALEGCEAA PSRKLGYMEA CAACGDVRFV PCETCYGSCK IFVEDDDADD RYHDVGEFRR CSDCNENGLV RCPVCCC

Best Arabidopsis Sequence Match ( AT5G39865.1 )
(BLAST)

001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE

Arabidopsis Description

Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.