CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007885_P001	Maize	mitochondrion	60.22	73.66
Os07t0159900-01	Rice	mitochondrion	64.6	69.14
Zm00001d018827_P001	Maize	mitochondrion	64.96	66.17
TraesCS2B01G263800.1	Wheat	mitochondrion	59.85	60.74
HORVU2Hr1G059940.1	Barley	mitochondrion	59.12	60.0
TraesCS2A01G249000.1	Wheat	mitochondrion	59.12	60.0
TraesCS2D01G250600.1	Wheat	mitochondrion	59.12	60.0
Zm00001d012904_P001	Maize	cytosol	25.18	55.65
VIT_08s0032g01030.t01	Wine grape	cytosol	29.56	44.26
EER94843	Sorghum	cytosol	28.47	38.42
KXG36862	Sorghum	cytosol	26.64	34.27
Bra005898.1-P	Field mustard	cytosol, mitochondrion	30.66	34.01
AT5G06470.1	Thale cress	cytosol, mitochondrion	29.56	33.89
CDX98926	Canola	cytosol	29.2	33.33
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	29.56	33.2
CDY67834	Canola	cytosol	29.2	33.06
Bra009197.1-P	Field mustard	cytosol	29.2	33.06
KRH72143	Soybean	mitochondrion	29.93	31.06
EER91159	Sorghum	mitochondrion	40.15	30.9
EES18035	Sorghum	mitochondrion	26.64	30.42
KRG96283	Soybean	mitochondrion	28.1	30.32
CDY55763	Canola	cytosol, mitochondrion	24.45	30.18
CDX81007	Canola	cytosol, mitochondrion	24.45	30.18
KRH68025	Soybean	cytosol	28.83	29.92
KRH32876	Soybean	cytosol	29.93	29.71
KXG29248	Sorghum	cytosol	35.04	29.18
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	31.02	28.43
EES19677	Sorghum	plastid	26.28	27.27
EER95421	Sorghum	mitochondrion, plastid	32.48	26.49
AT3G11773.2	Thale cress	cytosol	18.98	26.0
VIT_13s0073g00520.t01	Wine grape	cytosol	35.4	25.8
KRH34627	Soybean	cytosol	34.67	25.75
Solyc11g006430.1.1	Tomato	cytosol	33.58	25.48
PGSC0003DMT400005022	Potato	cytosol	33.58	25.07
KRG92161	Soybean	cytosol	34.67	25.0
KXG33640	Sorghum	mitochondrion	24.09	24.91
Bra028902.1-P	Field mustard	mitochondrion	32.48	24.86
CDY04838	Canola	mitochondrion	32.12	24.58
EES05526	Sorghum	mitochondrion	31.75	22.89
OQU81447	Sorghum	plastid	15.33	22.22
KXG31460	Sorghum	cytosol	31.75	21.75
EES10743	Sorghum	cytosol	35.77	21.73
AT5G01420.1	Thale cress	cytosol	31.39	21.45
EES14625	Sorghum	cytosol, plastid	28.1	19.01
EER88108	Sorghum	plastid	30.66	18.42
OQU82428	Sorghum	cytosol, plastid	32.85	18.11

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8086426	UniProt:C5X9N3	EnsemblPlants:EER95886	ProteinID:EER95886
ProteinID:EER95886.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF76	EnsemblPlantsGene:SORBI_3002G039100	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A82F93	RefSeq:XP_002459365.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:3804399..3806515

Molecular Weight (calculated)

29223.7 Da

IEP (calculated)

6.748

GRAVY (calculated)

-0.378

Length

274 amino acids

Sequence
(BLAST)

001: MIIKTLKARI LRALKAAGHD GAAGSPPPSP TKPAAHQYQY QYQYHGSDAL SDDASFFDAR EPDTPPTKAH HRRRRPSAAE PLDAWELVDD DQDDGGCASP
101: AAPDADPLLG FPARCPPGGE SVVVLYTTTL RGVRRTFEDC NVLRSLLENL GAPFQERDVS MDRGLRDQLW SLTGERGAVP PRLFVRGRDV GGAAQVLALH
201: EEGRLVPLLP VVPPSPCAGG DTKLPGAGGK RGCDACGGLR FVVCGECDGS RKVFDGGRCR GCNENGLVMC PLCL

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.