Factsheet for PGSC0003DMT400054970

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012904_P001	Maize	cytosol	19.67	38.71
Zm00001d007885_P001	Maize	mitochondrion	31.56	34.38
Os07t0159900-01	Rice	mitochondrion	34.84	33.2
VIT_13s0073g00520.t01	Wine grape	cytosol	47.95	31.12
TraesCS2B01G263800.1	Wheat	mitochondrion	34.43	31.11
HORVU2Hr1G059940.1	Barley	mitochondrion	34.43	31.11
TraesCS2A01G249000.1	Wheat	mitochondrion	34.02	30.74
TraesCS2D01G250600.1	Wheat	mitochondrion	34.02	30.74
PGSC0003DMT400005022	Potato	cytosol	45.08	29.97
EER95886	Sorghum	mitochondrion	33.2	29.56
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	35.66	29.1
PGSC0003DMT400078241	Potato	cytosol, plastid	28.28	28.75
KRH34627	Soybean	cytosol	43.44	28.73
PGSC0003DMT400047487	Potato	cytosol	30.74	28.41
PGSC0003DMT400078242	Potato	cytosol, plastid	29.51	28.35
Os03t0648800-00	Rice	mitochondrion	37.3	28.09
KRG92161	Soybean	cytosol	43.44	27.89
Zm00001d018827_P001	Maize	mitochondrion	30.74	27.88
TraesCS5B01G374300.1	Wheat	mitochondrion	34.84	26.98
TraesCS5D01G381700.1	Wheat	mitochondrion	35.25	26.71
PGSC0003DMT400015465	Potato	cytosol	29.1	25.91
TraesCS5A01G372200.1	Wheat	mitochondrion	34.84	25.84
Zm00001d013668_P001	Maize	mitochondrion	36.48	25.43
Bra028902.1-P	Field mustard	mitochondrion	36.89	25.14
CDY04838	Canola	mitochondrion	36.48	24.86
Zm00001d033205_P001	Maize	mitochondrion	35.25	24.86
EER91159	Sorghum	mitochondrion	36.07	24.72
PGSC0003DMT400031889	Potato	plastid	31.15	24.28
HORVU5Hr1G092580.1	Barley	cytosol	23.36	23.55
AT5G01420.1	Thale cress	cytosol	38.11	23.19
PGSC0003DMT400017853	Potato	cytosol	29.1	21.98
PGSC0003DMT400031969	Potato	cytosol	33.61	20.97
PGSC0003DMT400023120	Potato	cytosol	34.02	20.75
PGSC0003DMT400007648	Potato	cytosol	29.51	18.18
PGSC0003DMT400020985	Potato	cytosol, plastid	31.56	17.74
PGSC0003DMT400056766	Potato	cytosol	27.46	16.88
PGSC0003DMT400003335	Potato	cytosol	28.28	16.47

Protein Annotations

EntrezGene:102599269	Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:IPR002109	UniProt:M1BX51	PFAM:PF00462	EnsemblPlantsGene:PGSC0003DMG402021334	PGSC:PGSC0003DMG402021334	EnsemblPlants:PGSC0003DMT400054970
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF195	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00029622BB
RefSeq:XP_006348446.2	:	:	:	:	:

Description

Electron transporter [Source:PGSC_GENE;Acc:PGSC0003DMG402021334]

Coordinates

chr1:-:2757873..2758994

Molecular Weight (calculated)

28079.1 Da

IEP (calculated)

7.742

GRAVY (calculated)

-0.370

Length

244 amino acids

Sequence
(BLAST)

001: MKNINGGILR KIKSLPTLVF QVNHPTKHLQ SQLTTNTQHD NKMLCQNIDL ANDVDHQETT CEYETHHLFQ ESNTMEENKL LCDFEYKCPQ GGKDAIILYT
101: TSLRGIRKTF EDCNMIRFLL ESFRVVYYER DVSMHIEYRE ELWRILGGRI VPPRLFIKGR DIGRANEVVG LHEQGILKKL LHDIPLISSN FPCNGCCGIR
201: FVLCLSCHGC CKIIDQDQGK DTNGYRIRCP KCNENGLIKC PVCS

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.