Factsheet for TraesCS2A01G249000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G263800.1	Wheat	mitochondrion	96.67	96.67
TraesCS2D01G250600.1	Wheat	mitochondrion	95.56	95.56
HORVU2Hr1G059940.1	Barley	mitochondrion	90.74	90.74
Os07t0159900-01	Rice	mitochondrion	68.89	72.66
Zm00001d007885_P001	Maize	mitochondrion	53.7	64.73
EER95886	Sorghum	mitochondrion	60.0	59.12
Zm00001d018827_P001	Maize	mitochondrion	58.52	58.74
Zm00001d012904_P001	Maize	cytosol	25.93	56.45
VIT_08s0032g01030.t01	Wine grape	cytosol	29.26	43.17
TraesCS2A01G128800.1	Wheat	cytosol	27.78	36.95
TraesCS4A01G148500.1	Wheat	cytosol	27.04	35.78
AT5G06470.1	Thale cress	cytosol, mitochondrion	30.37	34.31
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	30.74	34.02
Bra005898.1-P	Field mustard	cytosol, mitochondrion	30.37	33.2
Bra009197.1-P	Field mustard	cytosol	29.63	33.06
CDX98926	Canola	cytosol	29.26	32.92
CDY67834	Canola	cytosol	29.26	32.64
TraesCS1A01G103100.1	Wheat	cytosol	36.67	32.57
KRH72143	Soybean	mitochondrion	31.11	31.82
KRH32876	Soybean	cytosol	32.22	31.52
KRG96283	Soybean	mitochondrion	29.63	31.5
KRH68025	Soybean	cytosol	30.37	31.06
TraesCS5A01G372200.1	Wheat	mitochondrion	37.41	30.7
CDX81007	Canola	cytosol, mitochondrion	24.07	29.28
CDY55763	Canola	cytosol, mitochondrion	24.07	29.28
TraesCS1A01G222600.1	Wheat	mitochondrion	24.81	29.0
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	31.11	28.09
AT3G11773.2	Thale cress	cytosol	20.74	28.0
TraesCS3A01G349200.1	Wheat	plastid	24.81	27.02
VIT_13s0073g00520.t01	Wine grape	cytosol	37.04	26.6
Solyc11g006430.1.1	Tomato	cytosol	34.44	25.76
KRH34627	Soybean	cytosol	34.07	24.93
CDY04838	Canola	mitochondrion	32.96	24.86
Bra028902.1-P	Field mustard	mitochondrion	32.96	24.86
PGSC0003DMT400005022	Potato	cytosol	33.7	24.8
TraesCS1A01G296500.1	Wheat	mitochondrion	22.59	24.11
KRG92161	Soybean	cytosol	33.7	23.95
TraesCS4A01G016500.1	Wheat	mitochondrion	29.26	23.94
TraesCS2A01G295000.1	Wheat	mitochondrion	36.67	23.35
AT5G01420.1	Thale cress	cytosol	34.07	22.94
TraesCS6A01G305800.1	Wheat	mitochondrion	32.22	22.6
TraesCS3A01G340600.1	Wheat	plastid	29.26	19.27
TraesCS3A01G158800.1	Wheat	cytosol	28.15	18.77
TraesCS2A01G521700.1	Wheat	plastid	31.48	18.56
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	30.74	18.24

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:Glutaredoxin	InterPro:IPR002109
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF76	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
EnsemblPlantsGene:TraesCS2A01G249000	EnsemblPlants:TraesCS2A01G249000.1	TIGR:cd03031	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:373420384..373421196

Molecular Weight (calculated)

28960.3 Da

IEP (calculated)

4.741

GRAVY (calculated)

-0.277

Length

270 amino acids

Sequence
(BLAST)

001: MTIETLKARI LRVLRSSLPA APAAASASLP PSPTKPGRVV LHSTDGLSDD ASFFDAQETP AKINLPAEPI DDDWELVDQD GYDRDSLASG PAPASDPDGM
101: LRDFPARCPP GGDEAVVLYT TTLRGIRKTF EDCNDVRALL DNLAVAFQER DVSMDRGLRE QLWAATGEKA VPPRLFVRGH DLGGAAQVLA LHEDGRLTSL
201: IQLPSLSPPE AAVSSNKKRE KCEACGGLRF VVCGECDGSR KLFDGERGGV RCHGCNENGL VMCTLCLYPS

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.