CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81007	Canola	cytosol, mitochondrion	90.09	90.09
Bra005898.1-P	Field mustard	cytosol, mitochondrion	98.65	88.66
CDX98926	Canola	cytosol	80.63	74.58
CDY67834	Canola	cytosol	81.08	74.38
AT5G06470.1	Thale cress	cytosol, mitochondrion	78.83	73.22
VIT_08s0032g01030.t01	Wine grape	cytosol	36.04	43.72
CDX80893	Canola	cytosol	20.72	42.2
CDY11274	Canola	cytosol	19.37	39.45
CDY00113	Canola	cytosol	20.72	34.59
KRH72143	Soybean	mitochondrion	40.99	34.47
Zm00001d012904_P001	Maize	cytosol	18.92	33.87
KRH32876	Soybean	cytosol	41.89	33.7
KRG96283	Soybean	mitochondrion	37.84	33.07
KRH68025	Soybean	cytosol	38.74	32.58
Os07t0159900-01	Rice	mitochondrion	31.98	27.73
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	36.94	27.42
Zm00001d007885_P001	Maize	mitochondrion	27.03	26.79
CDY01245	Canola	cytosol	30.63	26.25
CDX93821	Canola	cytosol	29.73	25.38
CDX90765	Canola	cytosol	29.73	24.72
CDX74801	Canola	cytosol	18.47	24.55
CDY05109	Canola	cytosol	29.28	24.53
CDY14169	Canola	cytosol	27.03	24.49
EER95886	Sorghum	mitochondrion	30.18	24.45
HORVU2Hr1G059940.1	Barley	mitochondrion	29.73	24.44
TraesCS2A01G249000.1	Wheat	mitochondrion	29.28	24.07
TraesCS2D01G250600.1	Wheat	mitochondrion	28.83	23.7
TraesCS2B01G263800.1	Wheat	mitochondrion	28.83	23.7
Zm00001d018827_P001	Maize	mitochondrion	27.48	22.68
CDY59509	Canola	cytosol, plastid	25.68	22.62
CDY67732	Canola	plastid	26.13	22.39
CDY32696	Canola	cytosol, plastid	25.23	22.31
CDY32794	Canola	peroxisome	25.68	22.01
CDY70634	Canola	plastid	26.13	21.72
Os03t0648800-00	Rice	mitochondrion	31.53	21.6
CDX78539	Canola	cytosol, plastid	25.23	21.37
CDY04902	Canola	nucleus	32.88	21.04
CDY04838	Canola	mitochondrion	33.78	20.95
CDX70521	Canola	plastid	25.23	20.9
TraesCS5B01G374300.1	Wheat	mitochondrion	29.28	20.63
TraesCS5D01G381700.1	Wheat	mitochondrion	29.73	20.5
TraesCS5A01G372200.1	Wheat	mitochondrion	29.73	20.06
Zm00001d013668_P001	Maize	mitochondrion	31.08	19.71
CDY18861	Canola	mitochondrion	21.62	19.51
CDX74802	Canola	cytosol, mitochondrion	21.62	19.43
CDY47842	Canola	cytosol	31.08	19.17
EER91159	Sorghum	mitochondrion	30.63	19.1
CDY62024	Canola	cytosol	30.63	18.89
Zm00001d033205_P001	Maize	mitochondrion	29.28	18.79
CDY04039	Canola	cytosol	26.58	17.51
CDY70277	Canola	cytosol	26.58	17.51
CDY14762	Canola	cytosol, plastid	26.58	16.3
HORVU5Hr1G092580.1	Barley	cytosol	17.57	16.12
CDY06932	Canola	plastid	26.58	16.03
CDX76039	Canola	plastid	25.23	15.95
CDY20015	Canola	cytosol	28.38	15.59
CDY22520	Canola	plastid	27.48	15.21
CDY35418	Canola	plastid	27.48	15.21
CDY06138	Canola	plastid	27.03	15.19
CDX72074	Canola	plastid	27.03	15.08
CDY30970	Canola	plastid	24.32	14.67
CDX86410	Canola	cytosol	26.58	14.36
CDX85224	Canola	cytosol	26.13	14.01
CDY30281	Canola	cytosol	23.42	13.47
CDY67051	Canola	cytosol	22.97	13.46
CDX80894	Canola	nucleus	5.86	6.63
CDY11275	Canola	nucleus	5.86	6.57

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	GO:A0A078IVY3	UniProt:A0A078IVY3	EnsemblPlants:CDY55763	ProteinID:CDY55763
ProteinID:CDY55763.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00017324001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF74	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE9062	SEG:seg	:	:	:

Description

BnaA03g55390DBnaA03g55390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVY3]

Coordinates

chrLK033427:-:15216..15959

Molecular Weight (calculated)

25486.3 Da

IEP (calculated)

5.135

GRAVY (calculated)

-0.709

Length

222 amino acids

Sequence
(BLAST)

001: MKGMKERLAK KIKLITIVST LKQGLAHHRN NVDRTIHHLK EEIFAESGQN RGCVTPTLLE LEEDVEEQEQ EHDLQEEERE ILLEFEENCP PGGEDSINHR
101: VKYKERDVSM DSEFRDQMWR LLGAKVTSPR LFVRGRYIGG ADEVVALNEN GKLKKLLEGI SLVDSPCECC KNERFLICSS CNGSSRLIVE HHDEEETSND
201: SKMWTRCREC NENGLVKCPL CS

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.