Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47842 | Canola | cytosol | 95.83 | 95.83 |
| Bra040917.1-P | Field mustard | cytosol | 95.56 | 95.56 |
| AT1G64500.1 | Thale cress | cytosol | 85.0 | 83.15 |
| VIT_02s0025g01710.t01 | Wine grape | cytosol | 48.33 | 46.03 |
| KRH60067 | Soybean | cytosol | 42.22 | 45.1 |
| Solyc08g082590.2.1 | Tomato | cytosol | 49.17 | 45.04 |
| PGSC0003DMT400031969 | Potato | cytosol | 47.78 | 43.99 |
| GSMUA_Achr10P... | Banana | cytosol | 39.44 | 38.17 |
| CDX80893 | Canola | cytosol | 11.39 | 37.61 |
| CDY11274 | Canola | cytosol | 11.39 | 37.61 |
| CDX93821 | Canola | cytosol | 26.67 | 36.92 |
| CDY01245 | Canola | cytosol | 26.39 | 36.68 |
| CDY00113 | Canola | cytosol | 13.33 | 36.09 |
| Os01t0235900-00 | Rice | plasma membrane | 38.61 | 35.55 |
| HORVU3Hr1G057240.1 | Barley | cytosol | 39.17 | 34.56 |
| Zm00001d039270_P001 | Maize | cytosol | 38.06 | 34.51 |
| KXG31460 | Sorghum | cytosol | 38.06 | 34.25 |
| CDX90765 | Canola | cytosol | 25.28 | 34.08 |
| TraesCS3D01G166500.1 | Wheat | cytosol | 38.06 | 33.99 |
| TraesCS3B01G189800.1 | Wheat | cytosol | 38.33 | 33.99 |
| CDX98926 | Canola | cytosol | 22.5 | 33.75 |
| TraesCS3A01G158800.1 | Wheat | cytosol | 37.78 | 33.58 |
| CDY67834 | Canola | cytosol | 22.5 | 33.47 |
| CDY05109 | Canola | cytosol | 24.44 | 33.21 |
| CDY14169 | Canola | cytosol | 21.67 | 31.84 |
| CDX74801 | Canola | cytosol | 14.72 | 31.74 |
| CDX81007 | Canola | cytosol, mitochondrion | 19.44 | 31.53 |
| CDY55763 | Canola | cytosol, mitochondrion | 18.89 | 30.63 |
| CDY67732 | Canola | plastid | 20.28 | 28.19 |
| CDY32794 | Canola | peroxisome | 20.28 | 28.19 |
| CDY70634 | Canola | plastid | 20.83 | 28.09 |
| CDY04902 | Canola | nucleus | 26.94 | 27.95 |
| CDY32696 | Canola | cytosol, plastid | 19.44 | 27.89 |
| CDY59509 | Canola | cytosol, plastid | 19.44 | 27.78 |
| CDX78539 | Canola | cytosol, plastid | 20.0 | 27.48 |
| CDX70521 | Canola | plastid | 20.28 | 27.24 |
| CDY04039 | Canola | cytosol | 24.44 | 26.11 |
| CDY70277 | Canola | cytosol | 24.17 | 25.82 |
| CDX74802 | Canola | cytosol, mitochondrion | 16.94 | 24.7 |
| CDY18861 | Canola | mitochondrion | 16.67 | 24.39 |
| CDY30281 | Canola | cytosol | 25.28 | 23.58 |
| CDY67051 | Canola | cytosol | 24.44 | 23.22 |
| CDX76039 | Canola | plastid | 22.22 | 22.79 |
| CDX86410 | Canola | cytosol | 25.83 | 22.63 |
| CDX85224 | Canola | cytosol | 25.56 | 22.22 |
| CDY06932 | Canola | plastid | 22.22 | 21.74 |
| CDY20015 | Canola | cytosol | 24.17 | 21.53 |
| CDY04838 | Canola | mitochondrion | 21.39 | 21.51 |
| CDY30970 | Canola | plastid | 21.94 | 21.47 |
| CDX72074 | Canola | plastid | 23.61 | 21.36 |
| CDY06138 | Canola | plastid | 23.33 | 21.27 |
| CDY14762 | Canola | cytosol, plastid | 21.11 | 20.99 |
| CDY35418 | Canola | plastid | 23.33 | 20.95 |
| CDY22520 | Canola | plastid | 23.06 | 20.7 |
| CDX80894 | Canola | nucleus | 8.06 | 14.8 |
| CDY11275 | Canola | nucleus | 8.06 | 14.65 |
Protein Annotations
| MapMan:20.5.4 | Gene3D:3.40.30.10 | GO:A0A078JCL9 | UniProt:A0A078JCL9 | EnsemblPlants:CDY62024 | ProteinID:CDY62024 |
| ProteinID:CDY62024.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00035846001 | InterPro:Glutaredoxin | InterPro:IPR002109 |
| PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF61 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0004EB63F5 | SEG:seg | : | : | : | : |
Description
BnaCnng39030DBnaCnng39030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCL9]
Coordinates
chrLK034081:-:27694..28776
Molecular Weight (calculated)
39741.1 Da
IEP (calculated)
5.949
GRAVY (calculated)
-0.580
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCASSKQVK ANVVSDVYKP PPSSFAVFNI NSIEEPWLKF EHDDDEKPTS AAAPIAVEEG DDDAPKTWDE VSKSLETHLK PADVKPTEVV SVEPPATPPR
101: RLPRKSASFH TLDELETKAR KQIAAQNPAT TVKLKKTESM SELRPEFNRT ESTQSNSGPR SVKENIFVLR DRERREKEGN KKPVMNWDPL REFPEKCPPG
201: GGDGLVVYTT SLQGVRRTYE DCMRVRAIME QQGVVVDERD VSLDAGVLSE LKSLLQEEAT VAPPRLFVKG RYLGGAAEVT AMNDNGKLGR VLRWARVERV
301: GEEGRQTCEG CGGARWVPCL ECGGSCKVAA AIVAAKEEGW ERCVKCNENG LIRCPVCFVN
101: RLPRKSASFH TLDELETKAR KQIAAQNPAT TVKLKKTESM SELRPEFNRT ESTQSNSGPR SVKENIFVLR DRERREKEGN KKPVMNWDPL REFPEKCPPG
201: GGDGLVVYTT SLQGVRRTYE DCMRVRAIME QQGVVVDERD VSLDAGVLSE LKSLLQEEAT VAPPRLFVKG RYLGGAAEVT AMNDNGKLGR VLRWARVERV
301: GEEGRQTCEG CGGARWVPCL ECGGSCKVAA AIVAAKEEGW ERCVKCNENG LIRCPVCFVN
001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN
Arabidopsis Description
F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.