Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039270_P001 | Maize | cytosol | 68.54 | 67.51 |
| KXG31460 | Sorghum | cytosol | 68.29 | 66.75 |
| TraesCS3B01G189800.1 | Wheat | cytosol | 68.8 | 66.26 |
| TraesCS3D01G166500.1 | Wheat | cytosol | 68.03 | 66.0 |
| TraesCS3A01G158800.1 | Wheat | cytosol | 68.03 | 65.68 |
| HORVU3Hr1G057240.1 | Barley | cytosol | 67.26 | 64.46 |
| GSMUA_Achr10P... | Banana | cytosol | 50.13 | 52.69 |
| KRH60067 | Soybean | cytosol | 34.78 | 40.36 |
| VIT_02s0025g01710.t01 | Wine grape | cytosol | 38.62 | 39.95 |
| CDY62024 | Canola | cytosol | 35.55 | 38.61 |
| Bra040917.1-P | Field mustard | cytosol | 35.04 | 38.06 |
| CDY47842 | Canola | cytosol | 35.04 | 38.06 |
| AT1G64500.1 | Thale cress | cytosol | 34.78 | 36.96 |
| Solyc08g082590.2.1 | Tomato | cytosol | 36.57 | 36.39 |
| PGSC0003DMT400031969 | Potato | cytosol | 36.06 | 36.06 |
| Os07t0659900-01 | Rice | cytosol | 19.44 | 36.02 |
| Os03t0356400-01 | Rice | cytosol | 18.41 | 35.47 |
| Os07t0159900-01 | Rice | mitochondrion | 20.2 | 30.86 |
| Os03t0648800-00 | Rice | mitochondrion | 24.81 | 29.94 |
| Os01t0829400-01 | Rice | mitochondrion | 16.88 | 25.88 |
| Os10t0343900-01 | Rice | cytosol | 8.7 | 25.76 |
| Os05t0471350-00 | Rice | mitochondrion, plastid | 16.88 | 25.68 |
| Os02t0102000-00 | Rice | cytosol | 20.46 | 24.84 |
| Os03t0170800-00 | Rice | mitochondrion | 19.44 | 23.6 |
| Os02t0748800-00 | Rice | cytosol, mitochondrion | 20.72 | 21.95 |
| Os06t0226100-00 | Rice | plastid | 21.48 | 21.93 |
| Os05t0353600-00 | Rice | plastid | 17.9 | 20.9 |
| Os04t0412800-01 | Rice | cytosol, plastid | 23.53 | 20.54 |
| Os04t0641300-01 | Rice | cytosol, plastid | 20.46 | 18.06 |
| Os08t0171333-00 | Rice | plastid | 13.81 | 17.09 |
Protein Annotations
| MapMan:20.5.4 | Gene3D:3.40.30.10 | EntrezGene:4327783 | ProteinID:BAA92911.1 | ProteinID:BAF04440.1 | ProteinID:BAS71226.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0005884 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009902 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016043 | GO:GO:0019725 | GO:GO:0022900 |
| GO:GO:0045454 | GO:GO:0051017 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:IPR002109 | EnsemblPlantsGene:Os01g0235900 |
| EnsemblPlants:Os01t0235900-00 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF196 | UniProt:Q9LI27 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI00000A82FB | RefSeq:XP_015626195.1 | SEG:seg | : | : |
Description
GRX-like protein 1, glutaredoxin-like protein 1Thioredoxin fold domain containing protein. (Os01t0235900-00)
Coordinates
chr1:+:7517314..7518489
Molecular Weight (calculated)
41824.3 Da
IEP (calculated)
5.041
GRAVY (calculated)
-0.613
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAGSKDVT VADVYRPPPT SVSLFDISAI EEPWLIATGK KNDEEEEEED EEEEEEEEEE EGKKPTTTVM PLPLLDKLDG YDLAPASWSE VSKALEDIKP
101: ALSSNTTTTE NAKKKTKKKK KKQPAPPPQP PTTTTTVLPE PVKAIEAAAK KAAAAPSARG ANEEVDRRPP PPELTGRRVV KDNPFLMRDR ENKGNDGGAA
201: AAAARWRRRD PFEGYPERRP PGASGGGVVL YTTTLRGVRR TFEDCERARK AVEACAEAVS AAGGSPVVVD ERDVSLHGEY LRELRGLAGA GDAPPRLFVM
301: GRYLGGADAC AELAESGKLR EMMRWARARG EACAAKDGRG CEGCGGARFV PCWECGGSCK VVAAGATAAA ADVERCAKCN ENGLMLCPIC H
101: ALSSNTTTTE NAKKKTKKKK KKQPAPPPQP PTTTTTVLPE PVKAIEAAAK KAAAAPSARG ANEEVDRRPP PPELTGRRVV KDNPFLMRDR ENKGNDGGAA
201: AAAARWRRRD PFEGYPERRP PGASGGGVVL YTTTLRGVRR TFEDCERARK AVEACAEAVS AAGGSPVVVD ERDVSLHGEY LRELRGLAGA GDAPPRLFVM
301: GRYLGGADAC AELAESGKLR EMMRWARARG EACAAKDGRG CEGCGGARFV PCWECGGSCK VVAAGATAAA ADVERCAKCN ENGLMLCPIC H
001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN
Arabidopsis Description
F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.