Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47842 | Canola | cytosol | 84.24 | 86.11 |
| Bra040917.1-P | Field mustard | cytosol | 83.97 | 85.83 |
| CDY62024 | Canola | cytosol | 83.15 | 85.0 |
| KRH60067 | Soybean | cytosol | 40.22 | 43.92 |
| VIT_02s0025g01710.t01 | Wine grape | cytosol | 44.84 | 43.65 |
| Solyc08g082590.2.1 | Tomato | cytosol | 45.92 | 43.0 |
| PGSC0003DMT400031969 | Potato | cytosol | 45.11 | 42.46 |
| GSMUA_Achr10P... | Banana | cytosol | 37.23 | 36.83 |
| Os01t0235900-00 | Rice | plasma membrane | 36.96 | 34.78 |
| AT5G06470.1 | Thale cress | cytosol, mitochondrion | 22.28 | 34.31 |
| HORVU3Hr1G057240.1 | Barley | cytosol | 36.96 | 33.33 |
| TraesCS3B01G189800.1 | Wheat | cytosol | 36.41 | 33.0 |
| TraesCS3D01G166500.1 | Wheat | cytosol | 36.14 | 33.0 |
| Zm00001d039270_P001 | Maize | cytosol | 35.6 | 33.0 |
| KXG31460 | Sorghum | cytosol | 35.6 | 32.75 |
| TraesCS3A01G158800.1 | Wheat | cytosol | 35.87 | 32.59 |
| AT1G32760.1 | Thale cress | plastid | 27.17 | 31.85 |
| AT3G11773.2 | Thale cress | cytosol | 16.3 | 30.0 |
| AT4G10630.1 | Thale cress | cytosol | 26.36 | 29.04 |
| AT5G13810.1 | Thale cress | plastid | 19.57 | 26.28 |
| AT5G58530.1 | Thale cress | cytosol, plastid | 19.02 | 25.64 |
| AT5G03870.1 | Thale cress | cytosol | 25.82 | 24.74 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 23.64 | 22.31 |
| AT3G28850.1 | Thale cress | cytosol | 25.82 | 22.2 |
| AT3G57070.1 | Thale cress | plastid | 22.01 | 19.42 |
| AT2G41330.1 | Thale cress | plastid | 21.2 | 19.4 |
| AT5G01420.1 | Thale cress | cytosol | 20.65 | 18.95 |
Protein Annotations
| MapMan:20.5.4 | Gene3D:3.40.30.10 | EntrezGene:842758 | ProteinID:AAF19670.1 | ProteinID:AEE34247.1 | ArrayExpress:AT1G64500 |
| EnsemblPlantsGene:AT1G64500 | RefSeq:AT1G64500 | TAIR:AT1G64500 | RefSeq:AT1G64500-TAIR-G | EnsemblPlants:AT1G64500.1 | TAIR:AT1G64500.1 |
| EMBL:AY056260 | EMBL:BT002750 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005884 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009902 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016043 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0051017 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:IPR002109 |
| RefSeq:NP_176631.1 | PFAM:PF00462 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF61 | UniProt:Q9SGW5 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000000BDA1 | SEG:seg | : | : |
Description
F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
Coordinates
chr1:+:23953099..23954610
Molecular Weight (calculated)
41018.5 Da
IEP (calculated)
5.480
GRAVY (calculated)
-0.702
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.