CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01710.t01	Wine grape	cytosol	59.35	52.91
PGSC0003DMT400031969	Potato	cytosol	56.38	48.59
Solyc08g082590.2.1	Tomato	cytosol	55.79	47.84
CDY47842	Canola	cytosol	45.4	42.5
Bra040917.1-P	Field mustard	cytosol	45.1	42.22
CDY62024	Canola	cytosol	45.1	42.22
GSMUA_Achr10P...	Banana	cytosol	45.1	40.86
AT1G64500.1	Thale cress	cytosol	43.92	40.22
KRH41800	Soybean	cytosol	27.89	34.81
Os01t0235900-00	Rice	plasma membrane	40.36	34.78
Zm00001d039270_P001	Maize	cytosol	40.65	34.51
KRH72143	Soybean	mitochondrion	26.11	33.33
KXG31460	Sorghum	cytosol	39.17	33.0
KRG96283	Soybean	mitochondrion	24.33	32.28
HORVU3Hr1G057240.1	Barley	cytosol	38.58	31.86
TraesCS3B01G189800.1	Wheat	cytosol	38.28	31.77
TraesCS3D01G166500.1	Wheat	cytosol	37.98	31.76
KRH68025	Soybean	cytosol	24.63	31.44
TraesCS3A01G158800.1	Wheat	cytosol	37.69	31.36
KRH30192	Soybean	plastid	21.36	31.17
KRH32876	Soybean	cytosol	25.52	31.16
KRG98239	Soybean	plastid	21.07	30.08
KRH14919	Soybean	plastid	21.36	29.75
KRH62918	Soybean	cytosol, plastid	22.26	29.18
KRH31178	Soybean	plastid	19.58	28.82
KRG97693	Soybean	plastid	18.99	27.95
KRH72724	Soybean	plastid	22.55	27.05
KRH17081	Soybean	plastid	23.15	25.83
KRH13399	Soybean	plastid	19.88	25.09
KRH20755	Soybean	plastid	20.18	25.09
KRH73271	Soybean	plastid	21.36	23.92
KRG92161	Soybean	cytosol	26.71	23.68
KRH34627	Soybean	cytosol	25.82	23.58
KRG93517	Soybean	cytosol	28.49	21.97
KRH67928	Soybean	cytosol	29.38	21.62
KRH01158	Soybean	cytosol	29.08	21.12
KRH40113	Soybean	cytosol, mitochondrion	28.19	20.74
KRG95123	Soybean	plastid	25.22	20.05
KRH66801	Soybean	plastid	16.91	15.2

Protein Annotations

EntrezGene:100809536	MapMan:20.5.4	Gene3D:3.40.30.10	EMBL:ACUP02003347	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G218400
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005884	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009902
GO:GO:0009987	GO:GO:0015035	GO:GO:0016043	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0051017	GO:GO:0055114	InterPro:Glutaredoxin	UniProt:I1K681	InterPro:IPR002109	EnsemblPlants:KRH60067
ProteinID:KRH60067	ProteinID:KRH60067.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF61
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002339571	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:39820569..39821991

Molecular Weight (calculated)

37490.9 Da

IEP (calculated)

7.834

GRAVY (calculated)

-0.612

Length

337 amino acids

Sequence
(BLAST)

001: MGCASSKRVD AAAVPYRPAP TSLAVFDINT IEEPWLKHLN NTTPLPQDNN KPSLPAPILH KLNLLDATDA PQSWDEISKT LQDLKPPSTS PQQQPQPPQK
101: TKSFHTVEEL DAKLNPKPEP KPKPNPELKK PADQIINSSI VTEPVRGNKL KENMFIVRDR LERQKEEKEL TFERLRRDPL SAFPEKCPPG GSEKVVLYTT
201: SLGGVRKTFE DCNRARDVLE GHRVVFDERD VSLHGEFLRE VKELVDGEGV ALPRVFVKGR YVGGLEELVE LNETGRLGRI LNATRVERGI GRQTCGGCGG
301: ARFVPCFDCA GSCKLLHRER CPNCNENGLV HCPACIS

Best Arabidopsis Sequence Match ( AT1G64500.1 )
(BLAST)

001: MGCTSSKQAK ANVVADVYKP PPSSFAVFDV NAIQEPWLKF EHEDDEKPPR STVFDRLDED DDDDDDDGDD APKTWEEVSK SLETKLKPAA VKPPEVDSVK
101: PPATPPRRLP RKSASFHTLD ELEVRAKRSI AAQIPTTMVK LKRTESMSKL RPESDDRTES TQSSYSGPRS VKENIFVKRD RERREKEGNK KPVMNWDPLR
201: EFPEKCPPGG GEGLIVYTTS LQGVRRTYED CMRVRAIMEQ QGVVVDERDV SLDAGVLSEL KELLQDEASV APPRVFVKGR YLGGAAEVTA MNENGKLGRV
301: LRWARVERVG EEGRLTCEGC GGARWLPCFE CGGSCKVAAV GAAKGERWER CVKCNENGLI RCPVCFVN

Arabidopsis Description

F1N19.7 [Source:UniProtKB/TrEMBL;Acc:Q9SGW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.