CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68025	Soybean	cytosol	91.34	87.88
KRH72143	Soybean	mitochondrion	66.54	64.02
KRH32876	Soybean	cytosol	68.11	62.68
VIT_08s0032g01030.t01	Wine grape	cytosol	42.13	58.47
AT5G06470.1	Thale cress	cytosol, mitochondrion	41.34	43.93
CDX81007	Canola	cytosol, mitochondrion	35.43	40.54
Bra005898.1-P	Field mustard	cytosol, mitochondrion	39.37	40.49
CDX98926	Canola	cytosol	38.19	40.42
CDY67834	Canola	cytosol	38.19	40.08
Bra009197.1-P	Field mustard	cytosol	37.8	39.67
CDY55763	Canola	cytosol, mitochondrion	33.07	37.84
AT3G11773.2	Thale cress	cytosol	29.53	37.5
Zm00001d012904_P001	Maize	cytosol	16.93	34.68
Zm00001d007885_P001	Maize	mitochondrion	29.13	33.04
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	38.19	32.44
Os07t0159900-01	Rice	mitochondrion	32.28	32.03
KRH34627	Soybean	cytosol	44.49	30.62
TraesCS2B01G263800.1	Wheat	mitochondrion	32.28	30.37
KRH41800	Soybean	cytosol	31.89	30.0
TraesCS2D01G250600.1	Wheat	mitochondrion	31.89	30.0
HORVU2Hr1G059940.1	Barley	mitochondrion	31.89	30.0
KRG92161	Soybean	cytosol	44.49	29.74
TraesCS2A01G249000.1	Wheat	mitochondrion	31.5	29.63
KRH62918	Soybean	cytosol, plastid	29.92	29.57
KRG97693	Soybean	plastid	25.98	28.82
KRH31178	Soybean	plastid	25.98	28.82
EER95886	Sorghum	mitochondrion	30.32	28.1
Zm00001d018827_P001	Maize	mitochondrion	29.13	27.51
KRH13399	Soybean	plastid	27.95	26.59
KRH20755	Soybean	plastid	28.35	26.57
KRH30192	Soybean	plastid	24.02	26.41
KRG98239	Soybean	plastid	24.02	25.85
KRH14919	Soybean	plastid	24.41	25.62
Os03t0648800-00	Rice	mitochondrion	32.68	25.62
TraesCS5B01G374300.1	Wheat	mitochondrion	30.71	24.76
TraesCS5D01G381700.1	Wheat	mitochondrion	31.1	24.53
KRH60067	Soybean	cytosol	32.28	24.33
TraesCS5A01G372200.1	Wheat	mitochondrion	31.1	24.01
KRH72724	Soybean	plastid	26.38	23.84
Zm00001d013668_P001	Maize	mitochondrion	32.68	23.71
Zm00001d033205_P001	Maize	mitochondrion	31.5	23.12
EER91159	Sorghum	mitochondrion	31.89	22.75
KRH17081	Soybean	plastid	25.98	21.85
HORVU5Hr1G092580.1	Barley	cytosol	20.08	21.07
KRH73271	Soybean	plastid	24.41	20.6
KRG95123	Soybean	plastid	30.32	18.16
KRH67928	Soybean	cytosol	32.28	17.9
KRG93517	Soybean	cytosol	29.13	16.93
KRH40113	Soybean	cytosol, mitochondrion	30.32	16.81
KRH01158	Soybean	cytosol	29.92	16.38
KRH66801	Soybean	plastid	18.9	12.8

Protein Annotations

EntrezGene:100791272	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02012150	EnsemblPlantsGene:GLYMA_19G200900	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	UniProt:I1NAV6	InterPro:IPR002109	EnsemblPlants:KRG96283	ProteinID:KRG96283
ProteinID:KRG96283.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF74	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0001BA8B35	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:45798259..45799393

Molecular Weight (calculated)

28821.8 Da

IEP (calculated)

8.076

GRAVY (calculated)

-0.413

Length

254 amino acids

Sequence
(BLAST)

001: MVRGRFVRKL KLVPTITNLK KQDLVLQKKF PTSYDDYKGN NLPELAVKDD NHFEEEEATV GSKKITELAE EKLVITKMPS CNNNEYPSLS DFKELRPQGG
101: NSHSIILYTT SLRGIRKTFQ DCNTIRFLLR SFKIMYHERD VSLHLEFREE LWKILGGKVI PPKLFIKGRY IGGADEVVGL HEMGWLGKFL EGTPTHSSDS
201: PCTGCANMRF TICSNCCGSC KVFTDNSDNK NNDECFVRCS LCNENGLVKC PVCC

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.