Factsheet for HORVU2Hr1G059940.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G249000.1	Wheat	mitochondrion	90.74	90.74
TraesCS2B01G263800.1	Wheat	mitochondrion	90.37	90.37
TraesCS2D01G250600.1	Wheat	mitochondrion	90.37	90.37
Os07t0159900-01	Rice	mitochondrion	67.78	71.48
Zm00001d007885_P001	Maize	mitochondrion	51.85	62.5
EER95886	Sorghum	mitochondrion	60.0	59.12
Zm00001d018827_P001	Maize	mitochondrion	58.15	58.36
Zm00001d012904_P001	Maize	cytosol	25.93	56.45
VIT_08s0032g01030.t01	Wine grape	cytosol	30.74	45.36
AT5G06470.1	Thale cress	cytosol, mitochondrion	31.11	35.15
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	31.11	34.43
Bra005898.1-P	Field mustard	cytosol, mitochondrion	31.11	34.01
HORVU7Hr1G043870.1	Barley	cytosol	9.63	33.77
Bra009197.1-P	Field mustard	cytosol	30.0	33.47
CDX98926	Canola	cytosol	29.63	33.33
CDY67834	Canola	cytosol	29.63	33.06
KRH72143	Soybean	mitochondrion	31.85	32.58
HORVU1Hr1G021100.2	Barley	cytosol	37.04	32.15
KRG96283	Soybean	mitochondrion	30.0	31.89
KRH32876	Soybean	cytosol	32.59	31.88
KRH68025	Soybean	cytosol	31.11	31.82
CDY55763	Canola	cytosol, mitochondrion	24.44	29.73
CDX81007	Canola	cytosol, mitochondrion	24.44	29.73
HORVU1Hr1G060210.1	Barley	mitochondrion, plastid	24.81	27.8
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	30.74	27.76
VIT_13s0073g00520.t01	Wine grape	cytosol	38.52	27.66
AT3G11773.2	Thale cress	cytosol	19.63	26.5
Solyc11g006430.1.1	Tomato	cytosol	35.19	26.32
HORVU3Hr1G087930.1	Barley	plastid	23.7	25.81
PGSC0003DMT400005022	Potato	cytosol	34.44	25.34
KRH34627	Soybean	cytosol	33.7	24.66
HORVU4Hr1G075190.2	Barley	mitochondrion	29.63	24.46
Bra028902.1-P	Field mustard	mitochondrion	32.22	24.3
CDY04838	Canola	mitochondrion	31.85	24.02
HORVU5Hr1G092580.1	Barley	cytosol	21.48	23.97
KRG92161	Soybean	cytosol	33.7	23.95
HORVU2Hr1G073040.1	Barley	cytosol	35.93	23.1
HORVU1Hr1G070570.1	Barley	plastid	22.22	22.99
HORVU0Hr1G017160.1	Barley	mitochondrion	31.48	22.37
AT5G01420.1	Thale cress	cytosol	32.96	22.19
HORVU7Hr1G076170.1	Barley	plastid	17.78	21.62
HORVU3Hr1G057240.1	Barley	cytosol	29.63	19.61
HORVU7Hr1G038000.2	Barley	cytosol, plastid	29.63	18.91
HORVU2Hr1G115200.2	Barley	cytosol	31.85	18.66

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EMBL:AK363068	UniProt:F2DGQ1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114
InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU2Hr1G059940	EnsemblPlants:HORVU2Hr1G059940.1	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF76	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00020067D7	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DGQ1]

Coordinates

chrchr2H:-:398465409..398467662

Molecular Weight (calculated)

28792.2 Da

IEP (calculated)

5.377

GRAVY (calculated)

-0.243

Length

270 amino acids

Sequence
(BLAST)

001: MTIQTLKARI LRVLRSSLPA APAAASAPLP PSPTKSGRVV LHSIDALSDD GSFFDAHETP TKSNLPAEPI DDDWELVDQD GYDRDSLATA PAPASDPDGI
101: LLDFPARCPP GGNEAVVLYT TTLRGIRKTF EDCNDVRALL ENLAVAFQER DVSMDRGLRE QLWAATGDKA VPPRLFVRGH DLGGAAQVLA LHEDGRLTSL
201: LQLPSHSPPE AAVSSNKKKG KCEACGGLSF VVCGECGGSR KLFDGERGGV RCHGCNENGL VMCKICMYPS

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.