Factsheet for VIT_13s0073g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0032g01030.t01	Wine grape	cytosol	28.46	58.47
Solyc11g006430.1.1	Tomato	cytosol	55.32	57.62
PGSC0003DMT400005022	Potato	cytosol	55.32	56.68
KRG92161	Soybean	cytosol	52.66	52.11
KRH34627	Soybean	cytosol	51.06	52.03
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	38.56	48.49
PGSC0003DMT400054970	Potato	cytosol, mitochondrion	31.12	47.95
Zm00001d007885_P001	Maize	mitochondrion	24.2	40.62
Os07t0159900-01	Rice	mitochondrion	27.66	40.62
Zm00001d012904_P001	Maize	cytosol	13.3	40.32
HORVU2Hr1G059940.1	Barley	mitochondrion	27.66	38.52
Os03t0648800-00	Rice	mitochondrion	32.71	37.96
CDY04838	Canola	mitochondrion	35.64	37.43
Bra028902.1-P	Field mustard	mitochondrion	35.37	37.15
TraesCS2D01G250600.1	Wheat	mitochondrion	26.6	37.04
TraesCS2A01G249000.1	Wheat	mitochondrion	26.6	37.04
TraesCS5B01G374300.1	Wheat	mitochondrion	30.85	36.83
TraesCS2B01G263800.1	Wheat	mitochondrion	26.33	36.67
TraesCS5D01G381700.1	Wheat	mitochondrion	30.85	36.02
TraesCS5A01G372200.1	Wheat	mitochondrion	31.12	35.56
EER95886	Sorghum	mitochondrion	25.8	35.4
Zm00001d033205_P001	Maize	mitochondrion	32.18	34.97
EER91159	Sorghum	mitochondrion	32.98	34.83
VIT_08s0007g05530.t01	Wine grape	cytosol	22.07	33.88
AT5G01420.1	Thale cress	cytosol	35.9	33.67
HORVU5Hr1G092580.1	Barley	cytosol	21.54	33.47
Zm00001d018827_P001	Maize	mitochondrion	23.94	33.46
Zm00001d013668_P001	Maize	mitochondrion	30.32	32.57
VIT_02s0025g02700.t01	Wine grape	cytosol	26.33	32.04
VIT_06s0004g07040.t01	Wine grape	cytosol, mitochondrion	20.74	31.71
VIT_08s0007g03220.t01	Wine grape	cytosol	31.65	29.9
VIT_13s0019g00340.t01	Wine grape	plastid	19.41	27.24
VIT_13s0067g01650.t01	Wine grape	plastid	21.28	27.21
VIT_02s0025g01710.t01	Wine grape	cytosol	26.33	26.19
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	25.0	20.89

Protein Annotations

EntrezGene:100262979	wikigene:100262979	Gene3D:3.40.30.10	MapMan:35.1	EMBL:AM464594	ProteinID:CAN72487
ProteinID:CAN72487.1	ProteinID:CCB49562	ProteinID:CCB49562.1	UniProt:F6HBH2	EMBL:FN595510	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	EntrezGene:LOC100262979	wikigene:LOC100262979	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF195	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001985AB5
ArrayExpress:VIT_13s0073g00520	EnsemblPlantsGene:VIT_13s0073g00520	EnsemblPlants:VIT_13s0073g00520.t01	RefSeq:XP_002263752	RefSeq:XP_002263752.1	SEG:seg

Description

No Description!

Coordinates

chr13:+:14355830..14357004

Molecular Weight (calculated)

42205.4 Da

IEP (calculated)

4.987

GRAVY (calculated)

-0.532

Length

376 amino acids

Sequence
(BLAST)

001: MKGMKGKLLK KLKSIRPIGY LKEDRVLQVN ASDGFLDGSS WNPSVGVQAQ FVCKGTVQNG LDRTGGTERE PEVIDVMELM RDLEGEDMEF DDLMDDKENI
101: GPPVRAKDPV GVKEKSENPV RSEPGFQRKD DGTWEATGNP GHTPLSEIDI SSFRRPDLNS GSLFDPNLLA AFQQAVMDQI RINEEERKAR MKEEDVEIDD
201: EPPPKARRVE DDTNPLLGFE ERCPPGGSDA VVLYTTSLRG IRKTFEDCTS IRFLLESFRV IFYERDVSMH LEFREELWRI LDCKALPPRL FIKGRYIGGA
301: EQVLGLHEQG RLRALFHGLP IDHSKGPCEG CAGIRFVMCY KCCGSRKIVS DDGNHGLSNN CPHCNENGLI ICPICC

Best Arabidopsis Sequence Match ( AT5G01420.1 )
(BLAST)

001: MKSSRMKFAK KLKSIRAGEY LNQDRILQVL SAADEFLPKI SNHIPQITSA ASIWRTPQKS ENQIANVTEL LENVRQGEEE ASGNFVGDEE NVRPPVNQIP
101: RVPCDRKESK LAVSCGSDTG IGRKSFGSGF RRPDLNSTTL FDPKLLEAFE LAALCFRKIK DFSREARVND EDDIVFPEEE EIRKDGNSIP PVISVVEYRR
201: KDENVVVLHK DDGNALQIVN AIREEVIGEE DIGKDGNTLM DPLLEFEERC PPGGEESVVF YTTTLRGIRK TFDDCNMIRF LLDSFKVKYY ERDVSMHREY
301: REELRRISAA ETEVLPPVLF VKGRCIGGAQ RVLGLHEQGK FKILFEGIPI TGDERCRRCD GFRFLMCDGC RGSRRIISGD GSRIQCLICN ENGLIVCVGC
401: S

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:Q9M031]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.