Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72143 | Soybean | mitochondrion | 61.75 | 42.8 |
| KRG96283 | Soybean | mitochondrion | 58.47 | 42.13 |
| Zm00001d012904_P001 | Maize | cytosol | 28.42 | 41.94 |
| AT5G06470.1 | Thale cress | cytosol, mitochondrion | 53.01 | 40.59 |
| KRH68025 | Soybean | cytosol | 58.47 | 40.53 |
| KRH32876 | Soybean | cytosol | 60.66 | 40.22 |
| Bra005898.1-P | Field mustard | cytosol, mitochondrion | 54.1 | 40.08 |
| CDY67834 | Canola | cytosol | 51.91 | 39.26 |
| CDX98926 | Canola | cytosol | 51.37 | 39.17 |
| Bra009197.1-P | Field mustard | cytosol | 51.37 | 38.84 |
| CDX81007 | Canola | cytosol, mitochondrion | 46.99 | 38.74 |
| CDY55763 | Canola | cytosol, mitochondrion | 43.72 | 36.04 |
| Zm00001d007885_P001 | Maize | mitochondrion | 41.53 | 33.93 |
| VIT_08s0007g05530.t01 | Wine grape | cytosol | 43.72 | 32.65 |
| AT3G11773.2 | Thale cress | cytosol | 35.52 | 32.5 |
| Os07t0159900-01 | Rice | mitochondrion | 45.36 | 32.42 |
| HORVU2Hr1G059940.1 | Barley | mitochondrion | 45.36 | 30.74 |
| VIT_06s0004g07040.t01 | Wine grape | cytosol, mitochondrion | 40.44 | 30.08 |
| TraesCS2B01G263800.1 | Wheat | mitochondrion | 44.26 | 30.0 |
| TraesCS2D01G250600.1 | Wheat | mitochondrion | 43.72 | 29.63 |
| EER95886 | Sorghum | mitochondrion | 44.26 | 29.56 |
| TraesCS2A01G249000.1 | Wheat | mitochondrion | 43.17 | 29.26 |
| VIT_13s0073g00520.t01 | Wine grape | cytosol | 58.47 | 28.46 |
| VIT_13s0019g00340.t01 | Wine grape | plastid | 41.53 | 28.36 |
| GSMUA_Achr6P03120_001 | Banana | cytosol, mitochondrion | 45.9 | 28.09 |
| VIT_02s0025g02700.t01 | Wine grape | cytosol | 46.45 | 27.51 |
| VIT_13s0067g01650.t01 | Wine grape | plastid | 43.72 | 27.21 |
| Zm00001d018827_P001 | Maize | mitochondrion | 39.89 | 27.14 |
| Os03t0648800-00 | Rice | mitochondrion | 45.36 | 25.62 |
| TraesCS5B01G374300.1 | Wheat | mitochondrion | 42.62 | 24.76 |
| TraesCS5D01G381700.1 | Wheat | mitochondrion | 43.17 | 24.53 |
| Zm00001d033205_P001 | Maize | mitochondrion | 45.36 | 23.99 |
| Zm00001d013668_P001 | Maize | mitochondrion | 44.81 | 23.43 |
| TraesCS5A01G372200.1 | Wheat | mitochondrion | 42.08 | 23.4 |
| EER91159 | Sorghum | mitochondrion | 45.36 | 23.31 |
| HORVU5Hr1G092580.1 | Barley | cytosol | 30.05 | 22.73 |
| VIT_02s0025g01710.t01 | Wine grape | cytosol | 46.45 | 22.49 |
| VIT_08s0007g03220.t01 | Wine grape | cytosol | 48.63 | 22.36 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 39.89 | 16.22 |
Protein Annotations
| EntrezGene:100259881 | wikigene:100259881 | Gene3D:3.40.30.10 | MapMan:35.1 | ProteinID:CBI39127 | ProteinID:CBI39127.3 |
| UniProt:D7U8R3 | EMBL:FN596742 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin | InterPro:IPR002109 |
| EntrezGene:LOC100259881 | wikigene:LOC100259881 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF74 |
| SUPFAM:SSF52833 | TIGR:TC53956 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001BE4CF0 | ArrayExpress:VIT_08s0032g01030 | EnsemblPlantsGene:VIT_08s0032g01030 |
| EnsemblPlants:VIT_08s0032g01030.t01 | unigene:Vvi.15996 | RefSeq:XP_002270030 | RefSeq:XP_002270030.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr8:+:5173669..5174662
Molecular Weight (calculated)
20447.8 Da
IEP (calculated)
6.491
GRAVY (calculated)
-0.269
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNASTHKAK VEIEEHPSLL DFEEKCPPGG RDSVIFYTTS LRGIRKTFED CSAIRFLLES FRVLFQERDV SMHMEFREEL WRMMGGRVVP PRLFIKGRHI
101: GGADEVVGLH EQGKLKKLLE GIPLSPTNNS PCKGCGGMKF LLCFNCNGSC KVIADGDGDG DDLLHIRCPE CNENGLIKCP ICC
101: GGADEVVGLH EQGKLKKLLE GIPLSPTNNS PCKGCGGMKF LLCFNCNGSC KVIADGDGDG DDLLHIRCPE CNENGLIKCP ICC
001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.