Factsheet for Bra009197.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67834	Canola	cytosol	98.35	98.35
CDX98926	Canola	cytosol	97.52	98.33
AT5G06470.1	Thale cress	cytosol, mitochondrion	81.41	82.43
Bra005898.1-P	Field mustard	cytosol, mitochondrion	83.88	82.19
VIT_08s0032g01030.t01	Wine grape	cytosol	38.84	51.37
KRH72143	Soybean	mitochondrion	43.8	40.15
KRH32876	Soybean	cytosol	44.21	38.77
Zm00001d012904_P001	Maize	cytosol	19.42	37.9
KRG96283	Soybean	mitochondrion	39.67	37.8
KRH68025	Soybean	cytosol	40.5	37.12
Bra002640.1-P	Field mustard	cytosol	17.36	35.59
Bra005786.1-P	Field mustard	cytosol	15.7	34.86
Os07t0159900-01	Rice	mitochondrion	35.95	33.98
Zm00001d007885_P001	Maize	mitochondrion	30.58	33.04
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	39.67	32.11
HORVU2Hr1G059940.1	Barley	mitochondrion	33.47	30.0
TraesCS2A01G249000.1	Wheat	mitochondrion	33.06	29.63
TraesCS2B01G263800.1	Wheat	mitochondrion	32.64	29.26
TraesCS2D01G250600.1	Wheat	mitochondrion	32.64	29.26
EER95886	Sorghum	mitochondrion	33.06	29.2
Bra020363.1-P	Field mustard	cytosol, plastid	30.17	28.97
Zm00001d018827_P001	Maize	mitochondrion	31.41	28.25
Bra023284.1-P	Field mustard	cytosol	34.71	28.0
Os03t0648800-00	Rice	mitochondrion	36.78	27.47
Bra000716.1-P	Field mustard	cytosol	33.88	26.45
TraesCS5B01G374300.1	Wheat	mitochondrion	34.3	26.35
Bra008801.1-P	Field mustard	plastid	28.93	26.22
TraesCS5D01G381700.1	Wheat	mitochondrion	34.71	26.09
Bra004972.1-P	Field mustard	mitochondrion	26.45	25.91
TraesCS5A01G372200.1	Wheat	mitochondrion	34.71	25.53
Bra006216.1-P	Field mustard	plastid	27.69	25.38
Zm00001d013668_P001	Maize	mitochondrion	35.95	24.86
EER91159	Sorghum	mitochondrion	35.95	24.44
Bra028902.1-P	Field mustard	mitochondrion	35.95	24.3
Bra028812.1-P	Field mustard	nucleus	34.71	24.07
Zm00001d033205_P001	Maize	mitochondrion	34.3	23.99
Bra004971.1-P	Field mustard	plastid	24.79	23.72
HORVU5Hr1G092580.1	Barley	cytosol	23.55	23.55
Bra040917.1-P	Field mustard	cytosol	34.3	23.06
Bra033062.1-P	Field mustard	cytosol	29.75	21.36
Bra016941.1-P	Field mustard	plastid	30.99	20.38
Bra007299.1-P	Field mustard	plastid	30.58	18.73
Bra000225.1-P	Field mustard	plastid	30.99	18.7
Bra014646.1-P	Field mustard	plastid	30.17	18.58
Bra039044.1-P	Field mustard	cytosol	31.82	18.25
Bra025357.1-P	Field mustard	cytosol	30.58	18.0
Bra025638.1-P	Field mustard	cytosol	27.69	16.34

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra009197	EnsemblPlants:Bra009197.1	EnsemblPlants:Bra009197.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CYA0	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF74	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002544FF8
SEG:seg	:	:	:	:	:

Description

AT5G06470 (E=2e-102) | glutaredoxin family protein

Coordinates

chrA10:-:15609302..15610030

Molecular Weight (calculated)

27749.4 Da

IEP (calculated)

7.357

GRAVY (calculated)

-0.554

Length

242 amino acids

Sequence
(BLAST)

001: MKGMKERLAK KIKLITIVSS LKQGLAHHKS KIDRTIHHIR DEIVAESGQR KGCVTPTLPE LEYVDVSEQE HDVEEEEREI LSEFEENCPP GGEDSVVFYA
101: TGLRGVRKTF EACRRVRFLL ENHMVRYKER DVSVDSEYRD EMWRLLGRKV TSPRLFIRGR YIGGADEVVA LNENGKLKKL LQGISRVHSP CECCLNERFL
201: ICSSCNGSSR LIAEDEETSN GTMWTRCREC NEKGLVRCPL CT

Best Arabidopsis Sequence Match ( AT5G06470.1 )
(BLAST)

001: MKGMKERLVK KIKLITTVKT LKQSLTLHKS TIDRTIHHLR DEIVAESGQS KGCVTPTLLE LEDAEEHNLE EERGILLEFK ENCPPGGEDS VVFYTTGLRS
101: VRKTFEACRR VRFLLENHQV MYRERDVSMD SEFREEMWRL LGGKVTSPRL FIRGRYIGGA EEVVALNENG KLKKLLQGIS QVDSPCESCE NERFLICSSC
201: NGSTRLLAEH HDEESSNDNM WTRCRECNEN GLVKCPLCT

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FNG2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.