Factsheet for Bra025357.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86410	Canola	cytosol	100.0	100.0
Bra033062.1-P	Field mustard	cytosol	62.29	75.96
Bra039044.1-P	Field mustard	cytosol	77.37	75.36
AT3G28850.1	Thale cress	cytosol	76.89	73.83
Bra025638.1-P	Field mustard	cytosol	58.88	59.02
PGSC0003DMT400017853	Potato	cytosol	41.12	52.32
PGSC0003DMT400003335	Potato	cytosol	53.28	52.27
Solyc02g087850.1.1	Tomato	cytosol, plastid	52.55	51.55
PGSC0003DMT400056766	Potato	cytosol	47.69	49.37
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	53.53	48.89
Zm00001d026424_P001	Maize	cytosol	14.84	48.8
KRH40113	Soybean	cytosol, mitochondrion	52.55	47.16
Solyc02g067400.1.1	Tomato	cytosol	32.12	46.48
KRH01158	Soybean	cytosol	52.31	46.34
KRG93517	Soybean	cytosol	47.69	44.85
Bra005786.1-P	Field mustard	cytosol	11.68	44.04
Bra002640.1-P	Field mustard	cytosol	11.92	41.53
GSMUA_Achr4P00540_001	Banana	mitochondrion	38.44	40.2
GSMUA_Achr8P24180_001	Banana	cytosol	33.58	39.54
GSMUA_Achr3P01620_001	Banana	mitochondrion	33.82	39.38
Zm00001d027853_P001	Maize	plastid	31.14	39.26
Os03t0170800-00	Rice	mitochondrion	30.41	38.82
TraesCS4D01G286300.1	Wheat	mitochondrion	30.66	38.65
TraesCS4A01G016500.1	Wheat	mitochondrion	30.9	38.48
HORVU4Hr1G075190.2	Barley	mitochondrion	30.41	38.23
TraesCS4B01G287700.1	Wheat	mitochondrion	30.41	38.11
EER95421	Sorghum	mitochondrion, plastid	30.66	37.5
Os02t0748800-00	Rice	cytosol, mitochondrion	33.33	37.13
EES05526	Sorghum	mitochondrion	33.58	36.32
TraesCS6D01G285000.1	Wheat	mitochondrion	32.36	35.19
HORVU0Hr1G017160.1	Barley	mitochondrion	32.36	35.0
TraesCS6B01G334000.1	Wheat	mitochondrion	32.36	34.82
Zm00001d052252_P001	Maize	mitochondrion	31.14	34.78
Zm00001d018058_P001	Maize	plastid	31.87	34.75
TraesCS6A01G305800.1	Wheat	mitochondrion	32.36	34.55
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	33.33	33.91
Bra006216.1-P	Field mustard	plastid	21.41	33.33
Bra016941.1-P	Field mustard	plastid	29.2	32.61
Zm00001d002123_P001	Maize	plastid	33.33	32.31
Bra008801.1-P	Field mustard	plastid	20.92	32.21
Os06t0226100-00	Rice	plastid	29.93	32.11
Bra020363.1-P	Field mustard	cytosol, plastid	19.46	31.75
Os04t0641300-01	Rice	cytosol, plastid	33.58	31.15
Bra023284.1-P	Field mustard	cytosol	22.63	31.0
Bra028812.1-P	Field mustard	nucleus	26.28	30.95
Bra014646.1-P	Field mustard	plastid	29.44	30.79
Bra004972.1-P	Field mustard	mitochondrion	18.49	30.77
Bra007299.1-P	Field mustard	plastid	29.44	30.63
Bra009197.1-P	Field mustard	cytosol	18.0	30.58
Bra000225.1-P	Field mustard	plastid	29.44	30.17
Bra000716.1-P	Field mustard	cytosol	22.63	30.0
TraesCS2B01G551200.1	Wheat	cytosol, plastid	33.33	29.91
TraesCS2D01G523500.1	Wheat	plastid	33.33	29.91
HORVU2Hr1G115200.2	Barley	cytosol	33.33	29.72
TraesCS2A01G521700.1	Wheat	plastid	33.09	29.69
Zm00001d037218_P001	Maize	plastid	30.66	29.44
Bra004971.1-P	Field mustard	plastid	18.0	29.25
TraesCS3D01G334100.1	Wheat	plastid	28.95	29.02
TraesCS3A01G340600.1	Wheat	plastid	28.71	28.78
Bra005898.1-P	Field mustard	cytosol, mitochondrion	17.27	28.74
TraesCS3B01G372200.1	Wheat	plastid	28.71	28.71
HORVU7Hr1G038000.2	Barley	cytosol, plastid	29.2	28.37
Zm00001d044841_P001	Maize	plastid	29.93	28.15
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	30.66	27.69
OQU82428	Sorghum	cytosol, plastid	33.33	27.57
Zm00001d024469_P001	Maize	cytosol, plastid	24.57	27.52
TraesCS7B01G090200.1	Wheat	cytosol, plastid	30.9	27.19
EER88108	Sorghum	plastid	30.17	27.19
Bra040917.1-P	Field mustard	cytosol	23.6	26.94
EES14625	Sorghum	cytosol, plastid	26.52	26.91
TraesCS7D01G186600.1	Wheat	plastid	30.9	25.25
Bra028902.1-P	Field mustard	mitochondrion	19.46	22.35
Os08t0171333-00	Rice	plastid	17.03	22.15

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra025357	EnsemblPlants:Bra025357.1	EnsemblPlants:Bra025357.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4E9A1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000253FB54	SEG:seg

Description

AT3G28850 (E=2e-159) | glutaredoxin family protein

Coordinates

chrA06:-:22023456..22024691

Molecular Weight (calculated)

46308.5 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.690

Length

411 amino acids

Sequence
(BLAST)

001: MGCTSSKHRK RCHHCRQGYC PVNMRQIQSV HHPSQHSDDS CHMVALSSTS LGSLKLCDSS DFSGNLVPAA DESLEKRRVS VNGFGSEKEK LSSEMQAKLM
101: EAKVWSSMMN EKIPKIVPKT PILTPPGEPE TINTWEMMDG LEDSVSPNHV RSFSFDTAGG HGGACERPKL NGEVKPLWLQ LEEEGLDDFD DFDPEIISSF
201: RRSLQELPSE HPFNISIHDL KLRPQFKFSD EEEEEEEATG KDKVTLYFTS LRGIRKTYED SCDVRSILKS IGVRVDERDV SMHSGFKEEL KELLGDKFKN
301: GVGVTLPRVF LGKKLLGGAE EIRKLNEEGK LEKLLQGCER VEENKNCNGQ ECEACGDVRF VPCETCSGSC KVYYEHEDDD NESVTEEREY GFQKCLDCNE
401: NGLIRCPVCC D

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.