Factsheet for GSMUA_Achr4P00540_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	65.65	63.86
GSMUA_Achr8P24180_001	Banana	cytosol	51.91	58.45
CDY00113	Canola	cytosol	17.3	51.13
GSMUA_Achr3P01620_001	Banana	mitochondrion	42.49	47.31
GSMUA_Achr8P22080_001	Banana	cytosol	22.39	44.67
GSMUA_Achr8P09670_001	Banana	cytosol	21.88	41.95
PGSC0003DMT400017853	Potato	cytosol	33.84	41.18
Bra033062.1-P	Field mustard	cytosol	35.11	40.95
CDY70277	Canola	cytosol	35.11	40.95
CDY04039	Canola	cytosol	34.86	40.65
CDY67051	Canola	cytosol	39.19	40.63
CDY30281	Canola	cytosol	39.69	40.41
GSMUA_Achr5P29410_001	Banana	mitochondrion	23.41	39.83
CDY20015	Canola	cytosol	40.46	39.36
Bra039044.1-P	Field mustard	cytosol	41.48	38.63
CDX86410	Canola	cytosol	40.2	38.44
Bra025357.1-P	Field mustard	cytosol	40.2	38.44
GSMUA_Achr5P14280_001	Banana	plastid	22.39	38.43
CDX85224	Canola	cytosol	40.46	38.41
Bra025638.1-P	Field mustard	cytosol	39.95	38.29
AT3G28850.1	Thale cress	cytosol	41.22	37.85
PGSC0003DMT400003335	Potato	cytosol	40.2	37.71
AT5G39865.1	Thale cress	cytosol, mitochondrion	37.4	37.69
PGSC0003DMT400056766	Potato	cytosol	37.91	37.53
Solyc02g087850.1.1	Tomato	cytosol, plastid	39.95	37.47
GSMUA_Achr6P23380_001	Banana	mitochondrion	22.39	37.45
GSMUA_Achr6P32840_001	Banana	cytosol	22.14	37.34
GSMUA_Achr7P18270_001	Banana	mitochondrion	24.43	36.92
GSMUA_Achr4P18760_001	Banana	plastid	22.14	36.86
Solyc02g067400.1.1	Tomato	cytosol	26.21	36.27
KRH40113	Soybean	cytosol, mitochondrion	42.24	36.24
KRH01158	Soybean	cytosol	42.75	36.21
GSMUA_Achr2P20360_001	Banana	cytosol	24.68	35.27
GSMUA_Achr6P13210_001	Banana	cytosol	24.43	34.78
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	39.19	34.22
KRG93517	Soybean	cytosol	37.91	34.1
GSMUA_Achr6P03120_001	Banana	cytosol, mitochondrion	21.63	28.43
GSMUA_Achr6P18300_001	Banana	cytosol	26.21	26.41
GSMUA_Achr9P02540_001	Banana	cytosol	24.94	25.0
GSMUA_Achr10P...	Banana	cytosol	21.88	23.12

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G00540_001	EnsemblPlants:GSMUA_Achr4P00540_001
EnsemblPlants:GSMUA_Achr4T00540_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0SJX1	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002969767	SEG:seg

Description

Putative Uncharacterized protein At5g39865 [Source:GMGC_GENE;Acc:GSMUA_Achr4G00540_001]

Coordinates

chr4:-:413319..414773

Molecular Weight (calculated)

43134.9 Da

IEP (calculated)

5.681

GRAVY (calculated)

-0.533

Length

393 amino acids

Sequence
(BLAST)

001: MGCTGSKQLR RRRGRSPGHF VRSHSIPVRY VDTAVAQRRC WDDHHAIALS SSALGSPELG RAKTWSEVIE RRIPKTPTMT PPNEPEVINA WELMADLEDA
101: SPLLLPAVGV NRSFSFHTSR DLSPEDSIVS DFDPEILSSF RKALDELSPQ HQFCSIDRPA EPDDEEEEPS DATTRTAETR PKESADGRED PKSISIVRAR
201: IDEFQQKIDA RKTSSKPDPA KVAPTYKCPP GGQGKVVLYL TSLRGIRKTY EDCWAVGMIL KGYGVRVDER DVSLHAGFKD ELIDILGPGY GGKGLPRVFA
301: DGNYLGGAEE VRHLHELGRL SKLLDCCETT PSMGKGGGGG DAACEGCGGV RFVPCEICSG SCKVYVEEEE ELGGFHRCPE CNENGLVRCR LCC

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.