CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86410	Canola	cytosol	96.14	96.84
CDY00113	Canola	cytosol	26.33	81.95
CDY20015	Canola	cytosol	75.12	76.98
CDY70277	Canola	cytosol	62.08	76.26
CDY04039	Canola	cytosol	61.84	75.96
AT3G28850.1	Thale cress	cytosol	76.81	74.3
CDY30281	Canola	cytosol	57.73	61.92
CDY67051	Canola	cytosol	55.8	60.95
PGSC0003DMT400017853	Potato	cytosol	41.79	53.56
PGSC0003DMT400003335	Potato	cytosol	53.38	52.74
Solyc02g087850.1.1	Tomato	cytosol, plastid	52.66	52.03
PGSC0003DMT400056766	Potato	cytosol	47.58	49.62
Zm00001d026424_P001	Maize	cytosol	14.73	48.8
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	52.66	48.44
Solyc02g067400.1.1	Tomato	cytosol	32.61	47.54
KRH40113	Soybean	cytosol, mitochondrion	51.45	46.51
KRH01158	Soybean	cytosol	51.69	46.12
CDY11274	Canola	cytosol	11.84	44.95
KRG93517	Soybean	cytosol	47.34	44.85
CDX80893	Canola	cytosol	11.59	44.04
GSMUA_Achr4P00540_001	Banana	mitochondrion	38.41	40.46
CDX74801	Canola	cytosol	16.18	40.12
CDY14169	Canola	cytosol	23.67	40.0
GSMUA_Achr3P01620_001	Banana	mitochondrion	33.57	39.38
GSMUA_Achr8P24180_001	Banana	cytosol	33.09	39.26
Zm00001d027853_P001	Maize	plastid	30.68	38.96
Os03t0170800-00	Rice	mitochondrion	29.95	38.51
TraesCS4D01G286300.1	Wheat	mitochondrion	30.19	38.34
TraesCS4A01G016500.1	Wheat	mitochondrion	30.43	38.18
HORVU4Hr1G075190.2	Barley	mitochondrion	29.95	37.92
TraesCS4B01G287700.1	Wheat	mitochondrion	29.95	37.8
EER95421	Sorghum	mitochondrion, plastid	30.19	37.2
Os02t0748800-00	Rice	cytosol, mitochondrion	33.09	37.13
CDX93821	Canola	cytosol	22.95	36.54
EES05526	Sorghum	mitochondrion	33.33	36.32
CDY01245	Canola	cytosol	22.71	36.29
TraesCS6D01G285000.1	Wheat	mitochondrion	32.13	35.19
HORVU0Hr1G017160.1	Barley	mitochondrion	32.13	35.0
TraesCS6B01G334000.1	Wheat	mitochondrion	32.13	34.82
Zm00001d052252_P001	Maize	mitochondrion	30.92	34.78
Zm00001d018058_P001	Maize	plastid	31.64	34.75
TraesCS6A01G305800.1	Wheat	mitochondrion	32.13	34.55
CDX76039	Canola	plastid	29.23	34.47
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	33.33	34.16
CDX78539	Canola	cytosol, plastid	21.26	33.59
CDY05109	Canola	cytosol	21.5	33.58
CDX90765	Canola	cytosol	21.26	32.96
CDY30970	Canola	plastid	29.23	32.88
CDX70521	Canola	plastid	21.26	32.84
CDY32696	Canola	cytosol, plastid	19.81	32.67
CDY06932	Canola	plastid	28.99	32.61
CDY59509	Canola	cytosol, plastid	19.81	32.54
CDY14762	Canola	cytosol, plastid	28.26	32.32
Zm00001d002123_P001	Maize	plastid	33.09	32.31
CDY70634	Canola	plastid	20.77	32.21
CDY67732	Canola	plastid	20.05	32.05
CDY32794	Canola	peroxisome	19.81	31.66
Os06t0226100-00	Rice	plastid	29.23	31.59
CDY04902	Canola	nucleus	26.09	31.12
Os04t0641300-01	Rice	cytosol, plastid	33.09	30.93
CDX74802	Canola	cytosol, mitochondrion	18.36	30.77
CDY06138	Canola	plastid	29.23	30.63
CDY22520	Canola	plastid	29.47	30.42
CDY35418	Canola	plastid	29.23	30.17
CDX72074	Canola	plastid	28.99	30.15
CDY18861	Canola	mitochondrion	17.87	30.08
CDX98926	Canola	cytosol	17.39	30.0
CDY67834	Canola	cytosol	17.39	29.75
TraesCS2D01G523500.1	Wheat	plastid	32.85	29.69
TraesCS2B01G551200.1	Wheat	cytosol, plastid	32.85	29.69
HORVU2Hr1G115200.2	Barley	cytosol	32.85	29.5
TraesCS2A01G521700.1	Wheat	plastid	32.61	29.48
Zm00001d037218_P001	Maize	plastid	30.19	29.21
TraesCS3A01G340600.1	Wheat	plastid	28.5	28.78
TraesCS3D01G334100.1	Wheat	plastid	28.5	28.78
HORVU7Hr1G038000.2	Barley	cytosol, plastid	29.23	28.61
TraesCS3B01G372200.1	Wheat	plastid	28.26	28.47
Zm00001d044841_P001	Maize	plastid	29.47	27.92
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	30.68	27.91
OQU82428	Sorghum	cytosol, plastid	33.09	27.57
TraesCS7B01G090200.1	Wheat	cytosol, plastid	30.92	27.41
Zm00001d024469_P001	Maize	cytosol, plastid	24.15	27.25
CDX81007	Canola	cytosol, mitochondrion	14.49	27.03
EER88108	Sorghum	plastid	29.71	26.97
CDY47842	Canola	cytosol	23.19	26.67
EES14625	Sorghum	cytosol, plastid	25.85	26.42
CDY55763	Canola	cytosol, mitochondrion	14.01	26.13
CDY62024	Canola	cytosol	22.22	25.56
TraesCS7D01G186600.1	Wheat	plastid	30.92	25.45
CDY04838	Canola	mitochondrion	19.08	22.07
Os08t0171333-00	Rice	plastid	16.67	21.84
CDY11275	Canola	nucleus	9.66	20.2
CDX80894	Canola	nucleus	9.18	19.39

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:A0A078DAC3	EnsemblPlants:CDX85224	ProteinID:CDX85224	ProteinID:CDX85224.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00142855001	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE2D1F	SEG:seg	:	:	:

Description

BnaC07g25350D

Coordinates

chrLK031841:+:361242..362486

Molecular Weight (calculated)

46797.3 Da

IEP (calculated)

5.071

GRAVY (calculated)

-0.697

Length

414 amino acids

Sequence
(BLAST)

001: MGCTSSKHRK RCHHCRQGYC PVNMRQIQSV HHPSQHSDDS CHMVALSSTS LGSLKLCDSS DFSGNLVPAA DESREKRRVS VNGFVHRERS EKEKLSSEMQ
101: AKLMEAKVWS SMMNEKIPKI VPKTPILTPP GEPETINTWE MMDGLEDSVS PNHVRSFSFD TASGHGGCER PKLNGDVKPL WLQLEEEGLD DFDDFDPEII
201: SSFRRSLQEL PSEHPFNISI HDLKLRPQFK LSDEEEEEEE ATGKDKVILY FTSLRGIRKT YEDSCGVRSI LKSIGVRVDE RDVSMHSGFK EELKELLGGK
301: FKNGVGVTLP RVFLGKKLLG GAEEIRKLNE EGKLEKLLQG CERVEENKNC NGQECEACGD VRFVPCETCS GSCKVYYELE DDDDESVKEE REYGFQKCLD
401: CNENGLIRCP ICCD

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.