Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67051 | Canola | cytosol | 93.78 | 95.51 |
| CDY00113 | Canola | cytosol | 24.35 | 70.68 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 68.13 | 67.44 |
| CDY04039 | Canola | cytosol | 56.48 | 64.69 |
| CDY70277 | Canola | cytosol | 55.44 | 63.5 |
| CDY20015 | Canola | cytosol | 62.69 | 59.9 |
| CDX86410 | Canola | cytosol | 61.66 | 57.91 |
| CDX85224 | Canola | cytosol | 61.92 | 57.73 |
| PGSC0003DMT400017853 | Potato | cytosol | 46.37 | 55.42 |
| PGSC0003DMT400003335 | Potato | cytosol | 56.74 | 52.27 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 56.48 | 52.03 |
| PGSC0003DMT400056766 | Potato | cytosol | 50.52 | 49.12 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 56.99 | 48.89 |
| Solyc02g067400.1.1 | Tomato | cytosol | 35.75 | 48.59 |
| Zm00001d026424_P001 | Maize | cytosol | 15.29 | 47.2 |
| KRH40113 | Soybean | cytosol, mitochondrion | 55.18 | 46.51 |
| KRH01158 | Soybean | cytosol | 54.4 | 45.26 |
| KRG93517 | Soybean | cytosol | 51.04 | 45.08 |
| CDX74801 | Canola | cytosol | 18.13 | 41.92 |
| EER95421 | Sorghum | mitochondrion, plastid | 35.23 | 40.48 |
| Zm00001d027853_P001 | Maize | plastid | 33.94 | 40.18 |
| TraesCS4D01G286300.1 | Wheat | mitochondrion | 33.68 | 39.88 |
| HORVU4Hr1G075190.2 | Barley | mitochondrion | 33.68 | 39.76 |
| GSMUA_Achr4P00540_001 | Banana | mitochondrion | 40.41 | 39.69 |
| CDY11274 | Canola | cytosol | 11.14 | 39.45 |
| TraesCS4A01G016500.1 | Wheat | mitochondrion | 33.68 | 39.39 |
| CDY14169 | Canola | cytosol | 24.87 | 39.18 |
| Os03t0170800-00 | Rice | mitochondrion | 32.64 | 39.13 |
| GSMUA_Achr3P01620_001 | Banana | mitochondrion | 35.49 | 38.81 |
| TraesCS4B01G287700.1 | Wheat | mitochondrion | 32.38 | 38.11 |
| GSMUA_Achr8P24180_001 | Banana | cytosol | 34.46 | 38.11 |
| CDX80893 | Canola | cytosol | 10.36 | 36.7 |
| CDX93821 | Canola | cytosol | 24.61 | 36.54 |
| CDY01245 | Canola | cytosol | 24.35 | 36.29 |
| Os02t0748800-00 | Rice | cytosol, mitochondrion | 33.94 | 35.5 |
| Zm00001d052252_P001 | Maize | mitochondrion | 33.68 | 35.33 |
| EES05526 | Sorghum | mitochondrion | 34.72 | 35.26 |
| HORVU0Hr1G017160.1 | Barley | mitochondrion | 33.94 | 34.47 |
| TraesCS6D01G285000.1 | Wheat | mitochondrion | 33.68 | 34.39 |
| TraesCS6B01G334000.1 | Wheat | mitochondrion | 33.68 | 34.03 |
| CDX76039 | Canola | plastid | 30.83 | 33.9 |
| TraesCS6A01G305800.1 | Wheat | mitochondrion | 33.68 | 33.77 |
| Zm00001d018058_P001 | Maize | plastid | 32.9 | 33.69 |
| CDX78539 | Canola | cytosol, plastid | 22.8 | 33.59 |
| CDY05109 | Canola | cytosol | 22.8 | 33.21 |
| CDX90765 | Canola | cytosol | 22.8 | 32.96 |
| GSMUA_Achr7P20960_001 | Banana | mitochondrion, nucleus | 34.46 | 32.92 |
| CDX70521 | Canola | plastid | 22.8 | 32.84 |
| CDY67732 | Canola | plastid | 22.02 | 32.82 |
| CDY70634 | Canola | plastid | 22.54 | 32.58 |
| CDX74802 | Canola | cytosol, mitochondrion | 20.73 | 32.39 |
| CDY30970 | Canola | plastid | 30.83 | 32.34 |
| CDY06932 | Canola | plastid | 30.57 | 32.07 |
| Zm00001d002123_P001 | Maize | plastid | 34.97 | 31.84 |
| CDY14762 | Canola | cytosol, plastid | 29.53 | 31.49 |
| CDY18861 | Canola | mitochondrion | 19.95 | 31.3 |
| CDY32696 | Canola | cytosol, plastid | 20.21 | 31.08 |
| CDY32794 | Canola | peroxisome | 20.73 | 30.89 |
| Os04t0641300-01 | Rice | cytosol, plastid | 35.23 | 30.7 |
| CDX72074 | Canola | plastid | 31.61 | 30.65 |
| CDY06138 | Canola | plastid | 31.35 | 30.63 |
| CDY59509 | Canola | cytosol, plastid | 19.95 | 30.56 |
| Os06t0226100-00 | Rice | plastid | 30.31 | 30.55 |
| CDY04902 | Canola | nucleus | 26.94 | 29.97 |
| TraesCS2D01G523500.1 | Wheat | plastid | 35.49 | 29.91 |
| TraesCS2B01G551200.1 | Wheat | cytosol, plastid | 34.72 | 29.26 |
| TraesCS2A01G521700.1 | Wheat | plastid | 34.72 | 29.26 |
| Zm00001d037218_P001 | Maize | plastid | 32.38 | 29.21 |
| CDY22520 | Canola | plastid | 30.05 | 28.93 |
| CDY35418 | Canola | plastid | 30.05 | 28.93 |
| HORVU2Hr1G115200.2 | Barley | cytosol | 34.2 | 28.63 |
| HORVU7Hr1G038000.2 | Barley | cytosol, plastid | 31.09 | 28.37 |
| TraesCS3D01G334100.1 | Wheat | plastid | 29.53 | 27.8 |
| Zm00001d044841_P001 | Maize | plastid | 31.35 | 27.69 |
| OQU82428 | Sorghum | cytosol, plastid | 35.49 | 27.57 |
| TraesCS3B01G372200.1 | Wheat | plastid | 29.27 | 27.49 |
| TraesCS3A01G340600.1 | Wheat | plastid | 29.02 | 27.32 |
| Zm00001d024469_P001 | Maize | cytosol, plastid | 25.91 | 27.25 |
| EES14625 | Sorghum | cytosol, plastid | 28.24 | 26.91 |
| CDX98926 | Canola | cytosol | 16.58 | 26.67 |
| TraesCS7A01G185200.1 | Wheat | mitochondrion, plastid | 31.35 | 26.59 |
| EER88108 | Sorghum | plastid | 31.35 | 26.54 |
| CDY67834 | Canola | cytosol | 16.58 | 26.45 |
| TraesCS7B01G090200.1 | Wheat | cytosol, plastid | 31.61 | 26.12 |
| CDY47842 | Canola | cytosol | 24.09 | 25.83 |
| CDY62024 | Canola | cytosol | 23.58 | 25.28 |
| TraesCS7D01G186600.1 | Wheat | plastid | 31.61 | 24.25 |
| CDX81007 | Canola | cytosol, mitochondrion | 13.73 | 23.87 |
| CDY55763 | Canola | cytosol, mitochondrion | 13.47 | 23.42 |
| Os08t0171333-00 | Rice | plastid | 18.39 | 22.47 |
| CDY04838 | Canola | mitochondrion | 19.95 | 21.51 |
| CDX80894 | Canola | nucleus | 10.62 | 20.92 |
| CDY11275 | Canola | nucleus | 10.62 | 20.71 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:A0A078GXQ0 | UniProt:A0A078GXQ0 | EnsemblPlants:CDY30281 | ProteinID:CDY30281 |
| ProteinID:CDY30281.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00044936001 | InterPro:Glutaredoxin | InterPro:IPR002109 |
| PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF110 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0004EE92AA | SEG:seg | : | : | : | : |
Description
BnaC04g31920DBnaC04g31920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXQ0]
Coordinates
chrLK032251:-:340662..341927
Molecular Weight (calculated)
43307.5 Da
IEP (calculated)
5.239
GRAVY (calculated)
-0.523
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCASSKHKR RCSDCRGGLS PVVVPRSYSM HVHHPAQHSG DSHHTVALTS STVGSLTLCE CPFSLIDKHL EGIREKRVVS DEKELIPGDG FHQDDLEVKE
101: TEKLQSKLME AKVWSSMMNE RIPKLLPPKT PIVTPPGEPE TINTWELMEG LEDASPLRPP DHLRSFSFDV VRVQPCDEDD DDGPAPLDRP KSRFHDLDHP
201: EIVSTFRKSL QELPDDHPFH IRIPNPDKVI VYFTSLRGIR KTYEDGCNVR VILKSLGIRL DERDVSMHSG FKDELKELLR DEFNGGVGIT LPRVFLGSKY
301: LGGVEEIKKL NENGTLEKVV DGCERVEDGL TGCGIECEAC GDVRFVPCET CSGSCKIYYD KETEYGFQRC PDCNENGLIR CPICCD
101: TEKLQSKLME AKVWSSMMNE RIPKLLPPKT PIVTPPGEPE TINTWELMEG LEDASPLRPP DHLRSFSFDV VRVQPCDEDD DDGPAPLDRP KSRFHDLDHP
201: EIVSTFRKSL QELPDDHPFH IRIPNPDKVI VYFTSLRGIR KTYEDGCNVR VILKSLGIRL DERDVSMHSG FKDELKELLR DEFNGGVGIT LPRVFLGSKY
301: LGGVEEIKKL NENGTLEKVV DGCERVEDGL TGCGIECEAC GDVRFVPCET CSGSCKIYYD KETEYGFQRC PDCNENGLIR CPICCD
001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
Arabidopsis Description
Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.