Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G185200.1 | Wheat | mitochondrion, plastid | 89.36 | 83.08 |
| TraesCS7B01G090200.1 | Wheat | cytosol, plastid | 90.78 | 82.23 |
| TraesCS7D01G186600.1 | Wheat | plastid | 90.54 | 76.14 |
| Os06t0226100-00 | Rice | plastid | 52.01 | 57.44 |
| EER88108 | Sorghum | plastid | 57.45 | 53.29 |
| Zm00001d037218_P001 | Maize | plastid | 53.66 | 53.04 |
| Zm00001d044841_P001 | Maize | plastid | 53.66 | 51.95 |
| HORVU0Hr1G017160.1 | Barley | mitochondrion | 46.57 | 51.84 |
| CDY00113 | Canola | cytosol | 13.48 | 42.86 |
| HORVU7Hr1G043870.1 | Barley | cytosol | 7.8 | 42.86 |
| HORVU4Hr1G075190.2 | Barley | mitochondrion | 29.31 | 37.92 |
| HORVU3Hr1G087930.1 | Barley | plastid | 21.28 | 36.29 |
| CDY04039 | Canola | cytosol | 26.48 | 33.23 |
| PGSC0003DMT400017853 | Potato | cytosol | 25.3 | 33.13 |
| HORVU2Hr1G115200.2 | Barley | cytosol | 35.93 | 32.97 |
| HORVU1Hr1G070570.1 | Barley | plastid | 20.09 | 32.57 |
| HORVU1Hr1G021100.2 | Barley | cytosol | 23.88 | 32.48 |
| CDY70277 | Canola | cytosol | 25.53 | 32.05 |
| Bra033062.1-P | Field mustard | cytosol | 25.53 | 32.05 |
| HORVU1Hr1G060210.1 | Barley | mitochondrion, plastid | 17.97 | 31.54 |
| CDY67051 | Canola | cytosol | 28.13 | 31.4 |
| CDY30281 | Canola | cytosol | 28.37 | 31.09 |
| PGSC0003DMT400056766 | Potato | cytosol | 29.08 | 30.98 |
| PGSC0003DMT400003335 | Potato | cytosol | 30.5 | 30.79 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 30.26 | 30.55 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 31.91 | 30.0 |
| Bra025638.1-P | Field mustard | cytosol | 28.84 | 29.76 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 27.42 | 29.74 |
| CDY20015 | Canola | cytosol | 28.37 | 29.7 |
| HORVU2Hr1G059940.1 | Barley | mitochondrion | 18.91 | 29.63 |
| Solyc02g067400.1.1 | Tomato | cytosol | 19.86 | 29.58 |
| AT3G28850.1 | Thale cress | cytosol | 29.79 | 29.44 |
| Bra039044.1-P | Field mustard | cytosol | 29.31 | 29.38 |
| KRH40113 | Soybean | cytosol, mitochondrion | 31.68 | 29.26 |
| CDX85224 | Canola | cytosol | 28.61 | 29.23 |
| CDX86410 | Canola | cytosol | 28.37 | 29.2 |
| Bra025357.1-P | Field mustard | cytosol | 28.37 | 29.2 |
| KRH01158 | Soybean | cytosol | 31.91 | 29.09 |
| HORVU7Hr1G076170.1 | Barley | plastid | 14.89 | 28.38 |
| KRG93517 | Soybean | cytosol | 27.9 | 27.0 |
| HORVU2Hr1G073040.1 | Barley | cytosol | 25.3 | 25.48 |
| HORVU5Hr1G092580.1 | Barley | cytosol | 12.53 | 21.9 |
| HORVU3Hr1G057240.1 | Barley | cytosol | 20.33 | 21.08 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | UniProt:A0A287W385 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:Glutaredoxin |
| EnsemblPlantsGene:HORVU7Hr1G038000 | EnsemblPlants:HORVU7Hr1G038000.2 | InterPro:IPR002109 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 |
| PANTHER:PTHR10168:SF91 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000B47CC63 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:+:92817562..92819280
Molecular Weight (calculated)
44003.3 Da
IEP (calculated)
4.668
GRAVY (calculated)
-0.279
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCKGSKHAL HGGGGGGALE PRKCASGLVA RHSVALRSST LGTLSLDRAT AAAAVSFAGG DGATTTARSS AAGRCRSFAN GWFPASPKVE PGQPVKRQRL
101: APPRTPTKTP ARDPEEINVW ELMHGLDDDD DSAEEYDDCV DAQVPSACGS PEFDPDVLSA FREALVDLSP PHPDAAVATD GGAVVNKEEI QVFADVASDG
201: GAVVNKEEIQ VFADVASDGG AVVKKEEIQV FAGVVRARLD VLQGRIDSRS QKNPPPPPES RGRVVVYLTS LRGIRQTYED CWAASTILSS YGVHVDERDL
301: SMHAGYKDEL RDAVGAGASV LPQVFVDGWH LGGAEEVRRM HESGELAEAL DVCEAAPGAS GGGKEGPGGF GTEPCGGCGG ARFVPCDVCS GSCKVFVEDE
401: GGAGAFRRCP DCNENGLLRC PIC
101: APPRTPTKTP ARDPEEINVW ELMHGLDDDD DSAEEYDDCV DAQVPSACGS PEFDPDVLSA FREALVDLSP PHPDAAVATD GGAVVNKEEI QVFADVASDG
201: GAVVNKEEIQ VFADVASDGG AVVKKEEIQV FAGVVRARLD VLQGRIDSRS QKNPPPPPES RGRVVVYLTS LRGIRQTYED CWAASTILSS YGVHVDERDL
301: SMHAGYKDEL RDAVGAGASV LPQVFVDGWH LGGAEEVRRM HESGELAEAL DVCEAAPGAS GGGKEGPGGF GTEPCGGCGG ARFVPCDVCS GSCKVFVEDE
401: GGAGAFRRCP DCNENGLLRC PIC
001: MAGLEKNADF SGKTTKSATT TSFFNRSLTI HGRTVVDSGP KSHNLNPSLN RTTSITKFYT PVESMGTSLK GKVKNLCRLF ETSKPVKPAL AEIPQKQKSG
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
101: KSLLPESRIS PFSSLNNSVI RLPGTEDRIV VYFTSLRGIR RTYEDCYAVR MIFRGFRVWI DERDVSMDIA YRKELQIAMG EKSVSLPQVF IMGKYVGGAD
201: VIKSLFEIGE LAKILKEFPM RQPGFVCHCC GDIRFVPCSN CSGSKKLFDE DEDRVKRCPE CNENGLIRCP DCSS
Arabidopsis Description
AT5g13810/MAC12_24 [Source:UniProtKB/TrEMBL;Acc:Q9FFZ0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.