CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40113	Soybean	cytosol, mitochondrion	93.1	94.32
CDY00113	Canola	cytosol	17.89	62.41
PGSC0003DMT400017853	Potato	cytosol	41.16	59.13
KRG93517	Soybean	cytosol	55.39	58.81
Solyc02g087850.1.1	Tomato	cytosol, plastid	52.37	58.0
PGSC0003DMT400003335	Potato	cytosol	52.37	58.0
VIT_14s0108g00400.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	54.96	56.67
CDY04039	Canola	cytosol	40.95	56.38
CDY70277	Canola	cytosol	40.52	55.79
Bra033062.1-P	Field mustard	cytosol	40.52	55.79
PGSC0003DMT400056766	Potato	cytosol	47.63	55.67
CDY67051	Canola	cytosol	44.61	54.62
CDY30281	Canola	cytosol	45.26	54.4
CDY20015	Canola	cytosol	45.69	52.48
Solyc02g067400.1.1	Tomato	cytosol	32.11	52.46
Bra025638.1-P	Field mustard	cytosol	46.34	52.44
AT3G28850.1	Thale cress	cytosol	48.28	52.34
CDX86410	Canola	cytosol	46.34	52.31
Bra025357.1-P	Field mustard	cytosol	46.34	52.31
Bra039044.1-P	Field mustard	cytosol	47.41	52.13
Zm00001d026424_P001	Maize	cytosol	14.01	52.0
CDX85224	Canola	cytosol	46.12	51.69
AT5G39865.1	Thale cress	cytosol, mitochondrion	43.32	51.54
GSMUA_Achr3P01620_001	Banana	mitochondrion	34.27	45.04
Zm00001d027853_P001	Maize	plastid	30.39	43.25
GSMUA_Achr4P00540_001	Banana	mitochondrion	36.21	42.75
EER95421	Sorghum	mitochondrion, plastid	30.82	42.56
Os03t0170800-00	Rice	mitochondrion	29.53	42.55
HORVU4Hr1G075190.2	Barley	mitochondrion	29.74	42.2
TraesCS4A01G016500.1	Wheat	mitochondrion	29.96	42.12
TraesCS4B01G287700.1	Wheat	mitochondrion	29.74	42.07
TraesCS4D01G286300.1	Wheat	mitochondrion	29.53	42.02
KRH41800	Soybean	cytosol	24.35	41.85
GSMUA_Achr8P24180_001	Banana	cytosol	30.82	40.97
KRH30192	Soybean	plastid	18.75	37.66
EES05526	Sorghum	mitochondrion	30.39	37.11
KRG98239	Soybean	plastid	18.75	36.86
Os02t0748800-00	Rice	cytosol, mitochondrion	29.31	36.86
HORVU0Hr1G017160.1	Barley	mitochondrion	30.17	36.84
Zm00001d052252_P001	Maize	mitochondrion	29.09	36.68
TraesCS6B01G334000.1	Wheat	mitochondrion	30.17	36.65
Zm00001d018058_P001	Maize	plastid	29.74	36.6
TraesCS6D01G285000.1	Wheat	mitochondrion	29.74	36.51
TraesCS6A01G305800.1	Wheat	mitochondrion	30.17	36.36
KRG97693	Soybean	plastid	17.67	35.81
GSMUA_Achr7P20960_001	Banana	mitochondrion, nucleus	31.03	35.64
KRH14919	Soybean	plastid	18.32	35.12
KRH31178	Soybean	plastid	17.24	34.93
Zm00001d002123_P001	Maize	plastid	31.9	34.91
KRH62918	Soybean	cytosol, plastid	18.75	33.85
Os04t0641300-01	Rice	cytosol, plastid	31.68	33.18
KRH13399	Soybean	plastid	18.97	32.96
Os06t0226100-00	Rice	plastid	26.72	32.38
KRH20755	Soybean	plastid	18.75	32.1
KRH72724	Soybean	plastid	19.4	32.03
HORVU7Hr1G038000.2	Barley	cytosol, plastid	29.09	31.91
HORVU2Hr1G115200.2	Barley	cytosol	31.68	31.89
KRH72143	Soybean	mitochondrion	18.1	31.82
TraesCS2B01G551200.1	Wheat	cytosol, plastid	31.25	31.66
TraesCS2D01G523500.1	Wheat	plastid	31.25	31.66
TraesCS2A01G521700.1	Wheat	plastid	31.03	31.44
KRG95123	Soybean	plastid	28.66	31.37
Zm00001d037218_P001	Maize	plastid	28.66	31.07
KRH32876	Soybean	cytosol	18.32	30.8
Zm00001d024469_P001	Maize	cytosol, plastid	24.35	30.79
Zm00001d044841_P001	Maize	plastid	28.23	29.98
KRG96283	Soybean	mitochondrion	16.38	29.92
TraesCS7A01G185200.1	Wheat	mitochondrion, plastid	29.31	29.89
KRH17081	Soybean	plastid	19.4	29.8
OQU82428	Sorghum	cytosol, plastid	31.9	29.78
TraesCS3D01G334100.1	Wheat	plastid	26.29	29.76
EES14625	Sorghum	cytosol, plastid	25.86	29.63
KRH68025	Soybean	cytosol	16.81	29.55
TraesCS7B01G090200.1	Wheat	cytosol, plastid	29.53	29.34
TraesCS3A01G340600.1	Wheat	plastid	25.86	29.27
TraesCS3B01G372200.1	Wheat	plastid	25.86	29.2
KRH60067	Soybean	cytosol	21.12	29.08
EER88108	Sorghum	plastid	28.23	28.73
KRH73271	Soybean	plastid	18.53	28.57
TraesCS7D01G186600.1	Wheat	plastid	29.74	27.44
KRH66801	Soybean	plastid	21.55	26.67
KRH67928	Soybean	cytosol	25.86	26.2
KRG92161	Soybean	cytosol	21.12	25.79
KRH34627	Soybean	cytosol	20.04	25.2
Os08t0171333-00	Rice	plastid	17.03	25.0

Protein Annotations

EntrezGene:100783996	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02011502	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G258500
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:K7MUS5	EnsemblPlants:KRH01158
ProteinID:KRH01158	ProteinID:KRH01158.1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF110
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00023D944F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:54395822..54398289

Molecular Weight (calculated)

51405.5 Da

IEP (calculated)

4.528

GRAVY (calculated)

-0.580

Length

464 amino acids

Sequence
(BLAST)

001: MGCASSKQKK CRRCNAPYSP APRSYSMHVH HPPLAEGDSY HVVALTSTTL GTLKLNSPAP TQNFANCDHD FKLSNGKVGN AESFRFDSES FVQRLEEKEK
101: EKKSEVLEKD KKEEFSMGLI EAKTWSNMIE QKLPKVFPKT PIRTPPGEPE TINTWELMEG LEDTTTPFRS PSHFRSFSFD FNGGDDVGVG DGGVDVDVDV
201: DPPKMSVVAS PKPMWLLMTE EESRLNPEIS DFDPEVISSF RKSLQQLSPD SPFHLQPAPP GDEEDKHGTK KGSPFEENEF VVDDVKVDDP CGKDKVVLYF
301: TSLRGVRKTY EACCQVRMIL KGLGVRVDER DVSMHSGFKE ELKELLGDGY GSLGLPRVFL GGNYIGGAEE IQRLHEDGKL EKLLVCCEKI EDSVGGDGGG
401: GVCEACGDIR FVPCETCCGS CKIYYTGDEE DEEEYVDGEV GECGFQRCPD CNENGLIRCP MCCC

Best Arabidopsis Sequence Match ( AT3G28850.1 )
(BLAST)

001: MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE
101: KSNLELQAKL MEAKVWSSMM NEKIPKIVPK TPIVTPPGEP ETINTWEMMD GLEDVLSPLR SPNHVKSFSF DVGPNGGKSN GSVKPVWLQM EEEEEGFEDF
201: DPEIISSFRK SLQELPSDHP FHISNHDFEL KPRFNFSDEE KEEEEQSVGK ERVILYFTSL RGIRKTYEES CDVRVILKSL GIRVDERDVS MHSGFKDELK
301: ELLGEKFNKG VGITLPRVFL GRKYIGGAEE IRKLNEDGKL EKLLGGCERV EENQNGNGLE CEACGDVRFV PCETCSGSCK VYYEYEDDDD DDDEGDDDES
401: VKEEREYGFQ TCPDCNENGL IRCPVCCD

Arabidopsis Description

Uncharacterized protein At3g28850 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.