Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G075190.2 | Barley | mitochondrion | 95.71 | 95.41 |
| TraesCS4A01G016500.1 | Wheat | mitochondrion | 96.32 | 95.15 |
| TraesCS4B01G287700.1 | Wheat | mitochondrion | 95.4 | 94.82 |
| Os03t0170800-00 | Rice | mitochondrion | 76.99 | 77.95 |
| EER95421 | Sorghum | mitochondrion, plastid | 78.22 | 75.89 |
| Zm00001d027853_P001 | Maize | plastid | 75.46 | 75.46 |
| GSMUA_Achr3P01620_001 | Banana | mitochondrion | 50.61 | 46.74 |
| CDY00113 | Canola | cytosol | 18.4 | 45.11 |
| TraesCS2D01G131300.1 | Wheat | cytosol | 25.15 | 39.42 |
| TraesCS6D01G285000.1 | Wheat | mitochondrion | 42.02 | 36.24 |
| Bra033062.1-P | Field mustard | cytosol | 36.81 | 35.61 |
| CDY70277 | Canola | cytosol | 36.81 | 35.61 |
| CDY04039 | Canola | cytosol | 36.2 | 35.01 |
| PGSC0003DMT400017853 | Potato | cytosol | 34.36 | 34.67 |
| TraesCS1D01G095500.1 | Wheat | cytosol | 32.21 | 34.2 |
| CDY67051 | Canola | cytosol | 39.26 | 33.77 |
| CDY30281 | Canola | cytosol | 39.88 | 33.68 |
| Bra025638.1-P | Field mustard | cytosol | 41.1 | 32.68 |
| TraesCS3D01G343100.1 | Wheat | plastid | 24.85 | 32.27 |
| PGSC0003DMT400056766 | Potato | cytosol | 39.26 | 32.24 |
| AT5G39865.1 | Thale cress | cytosol, mitochondrion | 38.34 | 32.05 |
| TraesCS1D01G224200.1 | Wheat | mitochondrion | 22.39 | 31.6 |
| PGSC0003DMT400003335 | Potato | cytosol | 40.18 | 31.26 |
| Solyc02g087850.1.1 | Tomato | cytosol, plastid | 40.18 | 31.26 |
| Bra025357.1-P | Field mustard | cytosol | 38.65 | 30.66 |
| CDX86410 | Canola | cytosol | 38.65 | 30.66 |
| Solyc02g067400.1.1 | Tomato | cytosol | 26.69 | 30.63 |
| CDY20015 | Canola | cytosol | 37.42 | 30.2 |
| CDX85224 | Canola | cytosol | 38.34 | 30.19 |
| AT3G28850.1 | Thale cress | cytosol | 39.57 | 30.14 |
| Bra039044.1-P | Field mustard | cytosol | 38.96 | 30.09 |
| KRG93517 | Soybean | cytosol | 39.88 | 29.75 |
| KRH40113 | Soybean | cytosol, mitochondrion | 41.72 | 29.69 |
| KRH01158 | Soybean | cytosol | 42.02 | 29.53 |
| TraesCS2D01G250600.1 | Wheat | mitochondrion | 24.23 | 29.26 |
| TraesCS2D01G523500.1 | Wheat | plastid | 40.49 | 28.82 |
| VIT_14s0108g00400.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 38.65 | 28.0 |
| TraesCS5D01G381700.1 | Wheat | mitochondrion | 26.38 | 26.71 |
| TraesCS1D01G294800.1 | Wheat | plastid | 20.55 | 26.69 |
| TraesCS3D01G334100.1 | Wheat | plastid | 33.13 | 26.34 |
| TraesCS7D01G186600.1 | Wheat | plastid | 39.26 | 25.45 |
| TraesCS2D01G292800.1 | Wheat | mitochondrion | 28.83 | 22.17 |
| TraesCS3D01G166500.1 | Wheat | cytosol | 23.62 | 19.11 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G286300.1 | EnsemblPlantsGene:TraesCS4D01G286300 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:Glutaredoxin |
| InterPro:IPR002109 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF130 | PFAM:PF00462 | PFscan:PS51354 |
| SEG:seg | SUPFAM:SSF52833 | TIGR:cd03031 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4D:-:456690743..456691723
Molecular Weight (calculated)
34853.4 Da
IEP (calculated)
5.659
GRAVY (calculated)
-0.289
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTTSRQAR HDLRYCPSPL PLPRCQSFPA RFDAGVHLVR LTSSTLGSLE VDKAAGPRAP EVADAGARAP RRMVPRTPTM TPPNEPEDID AWALMAGLEE
101: HSPLLAAPFG RHSFSFPIAA TAQQEFAASS KVTPLPMRMP SVNDEEMASK AKAPPRKAVL YFTSLRGVRA THEDCSLARA ILKGYGVRID ERDVSMHRGF
201: RDELHGLLGL RAGAMAKCWA PAAPTLPSLF VDGELVGNAE ELKRLHETGE LAARLDGCES GGPGACEACG DARFVLCEAC SGSCKVYVDE EDDEDGEGTG
301: DGGAGFRRCT ECNENGIVRC SVCCCS
101: HSPLLAAPFG RHSFSFPIAA TAQQEFAASS KVTPLPMRMP SVNDEEMASK AKAPPRKAVL YFTSLRGVRA THEDCSLARA ILKGYGVRID ERDVSMHRGF
201: RDELHGLLGL RAGAMAKCWA PAAPTLPSLF VDGELVGNAE ELKRLHETGE LAARLDGCES GGPGACEACG DARFVLCEAC SGSCKVYVDE EDDEDGEGTG
301: DGGAGFRRCT ECNENGIVRC SVCCCS
001: MGCASSKNRN RCRNCKGGLS PVIVPRSYSM HVHHPAQHTG DSYHTVALTS STIGSLSLCD SSLRHFHKHL EDSFYKQRVS DQMGEETLIS GNGFLHGDEE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
101: KMNLDLQAKV IEAKVWSSTI NEKIPKIVAK TPIVTPPGEP ETINTWELME GLEDVSPLRS PNHLRSFSFD FVRIQPSHDH DHDVAVSFDL PKSRFHENVK
201: SSCRVDDLDP PDIVSRFKRK TLGKERVVLY FTSLRGIRKT YEDCCNIRII LKSLGIRIDE RDVSMHSGFK DELKKLLEGK FNNGVGITLP RVFLGNKYLG
301: GVEEIKKLNE NGELEKLIKD CEMVEDGSPG FGNECEACGD VRFVPCETCS GSCKLYHEGE EEDEGVTEYG FQRCPYCNEN GLIRCHVCCE
Arabidopsis Description
Uncharacterized protein At5g39865 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.